Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq33 127 3e-24 >seq33 Length=1899332 Score = 127 bits (140), Expect = 3e-24 Identities = 476/734 (65%), Gaps = 33/734 (4%) Strand=Plus/Minus Query 118173 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 118232 |||||| |||| || |||| || |||| ||||| | ||||| || ||||| ||||| Sbjct 686565 CGTCTCTGATAAATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTGA 686506 Query 118233 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTA 118292 || ||||| || || ||||| || || | | ||| || | ||||| | || | Sbjct 686505 GCAGTGGATGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACCATGTTTGGCA 686446 Query 118293 ATGCGTTCCTTGAGAGCGTCCCAGTCGTA---GT---TGAGCTTTGTCTCCCCCTGCCAC 118346 || ||| ||||| | |||| | | || || | || | | || || Sbjct 686445 ATTTTTTCTTTGAGTGACACCCAATTCCACAAGTCTGTGGGGGTTTTATTCC------AC 686392 Query 118347 ATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCC 118406 |||||| | || | |||||||| || || | || ||| | |||||||| ||| Sbjct 686391 ATATCATATTGCAATATACCTTGACTGGCAGGACAGCCTTCATAAGTCTCATAGACGCCA 686332 Query 118407 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATG 118466 | ||| || || || | || || || || || | | ||| ||||||||||| || Sbjct 686331 TACTTCTCAGCTAACTCACAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATT 686272 Query 118467 CGAGCATTCA-TTGCCTTG--GCCTCG---TCGGAATCAA-ACGCGAGTCGGCACAAAAT 118519 | ||| | || ||| ||||| ||| || | |||| | | |||| Sbjct 686271 TGTTGATTTAATTTAATTGCTGCCTCACTTTCGTAAGGTATACGC-ATT------AAAAC 686219 Query 118520 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 118579 |||| |||| || | |||||||| || | || || || || || |||||||| || || Sbjct 686218 AAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTTGAGTT 686159 Query 118580 CCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 118638 || ||| ||| |||||| |||| ||| |||| |||||||||| | || | Sbjct 686158 TTTTGCC-TCTGGCACTGGATAATAATTTACATCAATAATTTTATTTAGATTCTGAGTTA 686100 Query 118639 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT 118698 | ||| || | ||| | | || | ||| | | | | || ||||| ||| Sbjct 686099 TAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGTTT---TGTCCTCATTCACAA 686043 Query 118699 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG-TGTAC 118757 || || | || ||||| || ||||| ||||||| ||||| | || || |||| Sbjct 686042 ACATATTTAAAGCAATTGATGCTAGATTGCACACAGCCACTTCATC-TGATGAGGTGTAT 685984 Query 118758 TCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 118817 |||| |||||| ||||||||||| | ||||| || |||||||||||||| || Sbjct 685983 TCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGTTGCTT 685924 Query 118818 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 118877 ||| | || || | ||| || |||||||||||||| || || || || ||| | | | Sbjct 685923 TTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTGCTTCG 685864 Query 118878 AGAATAGCCTTCCA 118891 | |||||| ||||| Sbjct 685863 ATAATAGCTTTCCA 685850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427492751320