Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq99 95.1 1e-14 >seq99 Length=970148 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | |||||| | |||||||| || ||||||||| || |||| Sbjct 886255 GCGTGAAGATGTACCGCGGGCTGGCGGAGTCCTTGCCGCCGCACAGCCGCGTACCGAACT 886196 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || || ||||||| |||||||| |||||| | ||||| |||| |||| Sbjct 886195 GACCGCGTGGTTCCAGCAGGTTGATGTTGTTGGAGCCCACATAGTTCTGCGCCAGGTTCA 886136 Query 152147 CAATCGT 152153 | || || Sbjct 886135 CTATAGT 886129 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCA-AGACGCGTACCGAATTG 117363 ||||| ||||| || | ||| || | |||||||| || ||| || ||||||||||| || Sbjct 886253 GTGAAGATGTACCGCGGGCTGGCGGAGTCCTTGCCGCC-GCACAGCCGCGTACCGAACTG 886195 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || | || |||| ||||| | |||||||| ||||||| |||| || |||| ||| || Sbjct 886194 ACCGCGTGGTTCCAGCAGGTTGATGTTGTTGGAGCCCACATAGTTCTGCGCCAGGTTCAC 886135 Query 117424 AATCGT 117429 || || Sbjct 886134 TATAGT 886129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209180320600