Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq33 664 0.0 seq416 104 3e-17 >seq33 Length=1899332 Score = 664 bits (736), Expect = 0.0 Identities = 1204/1747 (69%), Gaps = 22/1747 (1%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || || || || |||| ||||||||| || ||||||| |||| |||| | |||||| Sbjct 686913 GCTGGCTTCGTGCGTAAATAGTACATTCCCGTTTTTAAGCCCATTTTCCACGCATAGAAA 686854 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || ||||| ||| |||| | || || || | ||||||||| | || || || Sbjct 686853 TGAATAGATGTCAATTTACCATAATTTGGTTCAGCAACATGAATATTGAAGGATTGGCTC 686794 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 ||||| || || || ||||| ||||| ||||||| ||| | || ||| || | |||| Sbjct 686793 TGATCAATAAATGCCCCTCTGTCAGCAGCCATTTGTATTGTTGTTTTTACAGACACTTCC 686734 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG-GTTTG--TATTTTGAATGGAA 77039 || | |||||| | | | | ||||| | |||| | || |||||||||| || Sbjct 686733 CAGACAGTTTTATATAAGTCCCTTATATCTTTAGGAATTGCTTCAATATTTTGAATAGAT 686674 Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099 ||| || || || ||| || ||||| |||| ||| || | || |||||| Sbjct 686673 CCATTATTGTGGATGATAAGATTTTTCATATCTTCATCCCATAAATCAGCTTCAGTTAAA 686614 Query 77100 ACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 77159 ||| | | |||| ||||||| | ||| ||||| || ||||| |||| | ||| Sbjct 686613 TCTCGTAACAAATGATGATTAACAACTTGGAATTCACCTGACAAGACTCGTCTCTGATAA 686554 Query 77160 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCA 77219 || || ||| ||||||| | |||||||| |||||||| ||||||||||| || ||| Sbjct 686553 ATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTGAGCAGTGGATGCA 686494 Query 77220 GTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 77279 |||||||| || || | |||| |||||| ||||||||| | ||||| ||||| Sbjct 686493 GTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACCATGTTTGGCAATTTTTTCTTTG 686434 Query 77280 AGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATT 77339 || | ||||| ||| | |||| || || ||| | ||| ||||| | || Sbjct 686433 AGTGACACCCAATTCCACAAGTCTGTGGGGGTTTTATTCCACATATCATATTGCAATATA 686374 Query 77340 CCGTTACTAGCATATGATCCATTATATGTTTCATA-AGGTCCTTCTGTTTCAGCTAGTTC 77398 || | ||| ||| | || | ||| || ||||| | | | | || | ||||||| || Sbjct 686373 CCTTGACTGGCAGGACAGCCTTCATAAGTCTCATAGACGCCATACT-TCTCAGCTAACTC 686315 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 |||||| ||||| | ||| || |||||||||||||| || || | | ||| | | Sbjct 686314 ACAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTTGTTGATTTAATTTAAT 686255 Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518 |||| | ||| || | || | | | | || ||| ||||| |||||||| || || Sbjct 686254 TGCTGCCTCACTTTCGTAAGGTATACGCATTAAAACAAATGCATCAGCTAATCCTTGGAC 686195 Query 77519 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATA 77578 |||||| || || |||| || ||| |||| || |||| || ||||| | |||||||| Sbjct 686194 TCCAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCCTCTGGCACTGGATAATA 686135 Query 77579 ATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACT-TTAACCACGTCCTTTAGTT 77637 ||| | || ||||||||||| ||||| || | || | ||| || ||||||| || Sbjct 686134 ATTTACATCAATAATTTTATTTAGATT-CTGAGTTATAGTCTTAGTAACTTCCTTTAATT 686076 Query 77638 TAAGAAAATCAAATCTTC---CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGAT 77694 | |||| | || || | || | |||||||| || ||||| || |||||||||| Sbjct 686075 TGGTGAAATTATATGTTTTGTCCTCATTCACAAACATATTTAAAGCAATTGATGCTAGAT 686016 Query 77695 TACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTAC 77754 | || || || || |||| | || |||| || || || || || | || || | Sbjct 686015 TGCACACAGCCACTTCATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAGTTGCTGC 685956 Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814 |||| ||||| |||| || | ||||||||| ||| |||||||||| || |||||||| | Sbjct 685955 ATTTAATAGTACCCAAGTTCTTTTGGTTGCTTTTTCTATTGCATGAATCTTTATAAAGCA 685896 Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874 | | ||||| || ||||||| |||| ||||||||||| |||||| | ||| |||| Sbjct 685895 TGTATGGAGTTCCTGTTTCAACTTGTGCTTCGATAATAGCTTTCCAAAGAACTTGAGCTC 685836 Query 77875 TTATCATAGATTT--GTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTC 77932 | | | | || | | || | |||| ||||||||| ||| | ||||||||| Sbjct 685835 TCAC--TTGTTTCACGAAGCGACCCTCTTTTTCATATTTCTCATACAAAGCTTCAAATTC 685778 Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992 || |||||| || | | |||||| ||||||| |||||||| | ||| || Sbjct 685777 CTCACCCCAACAGTCTGCTAGTCCAGGACATTCATGGGGGCACATGATACTCCAATCTTG 685718 Query 77993 AT--CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050 || ||| || |||| |||||| || | ||||||||||||| |||| ||||| ||| Sbjct 685717 ATTGCTTTCT--ACTCTTTTCATGAACAAGTCAGGTATCCATAAAGCATAGAATAGCTCT 685660 Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCA 78110 | || | |||||| || || || |||||||| | ||| || || || | |||||| Sbjct 685659 CTGGCACGGACTTCTTCTTTCCCAGTGTTCTTTTTCAAATCAAGGAATTCAAATATATCA 685600 Query 78111 GAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCT 78170 | |||||||||||||| ||||| || | | || |||| |||||||||||| || ||| Sbjct 685599 GCATGCCATGGTTCTAAGTATATGGCAAATGCGCCGGGTCTTTTATTACCTCCTTGGTCT 685540 Query 78171 ATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCA 78230 | ||||| || ||||| || || ||||| ||||| || | | ||| ||||| ||| Sbjct 685539 ACATATCGAGCAGTGTTGTTGTACACTCTTAACATGGGTACTAGACCATTAGAGACACCA 685480 Query 78231 TTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTC 78288 ||||| |||| |||||| |||| |||| | ||| | | ||| | | ||||| | Sbjct 685479 TTTGTACCAGCTATATAAGTTCCCTTTGCTCTAATGCAGTGTACATGAAGA--CCTATCC 685422 Query 78289 CTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATAC 78348 | || || |||||| || || || || |||| || || || || || ||||| || | Sbjct 685421 CACCAGCTGACTTAGAAATGAGGGCACATTGTTTTAACGTGTCATAAATTCCCTCAATGC 685362 Query 78349 TGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 78408 | |||||| |||| | |||||| || ||| | ||| | | |||| |||| Sbjct 685361 TATCATCCCTCATTGCTATAAGAAAGCATGAAGATAATTGTGGTCGTGGAGTTGCTGCTG 685302 Query 78409 TAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 78468 || | || ||| |||||| ||||| ||||||| || || |||||||| || | | Sbjct 685301 AGAAAAGAGTTGGACTTGCATGTGTAAAATATTTTTCTGACAGAAGATTGTAGGTGTTTA 685242 Query 78469 TAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAG 78528 |||| || ||||| ||| ||||||| | || ||||| | ||||||||| | Sbjct 685241 TAGCCCCCTCAATGTCTTCGCCATGTATTCCTATAGAAACTCGCATGAGCATATGCTGTG 685182 Query 78529 GTCTTTC 78535 | ||||| Sbjct 685181 GCCTTTC 685175 >seq416 Length=155529 Score = 104 bits (114), Expect = 3e-17 Identities = 159/226 (70%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||||||| ||| | || || ||||| | || ||||| | ||| || || || Sbjct 138915 TCATCTCTAGAAATCAGCTCATTGCTGAATGTCAATCCAGGCATCAATCCGCGCTTCTTC 138856 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 | |||||| |||| || ||| ||||| |||||||||||||| || || ||||| || Sbjct 138855 ATCCAAAAGATTGATGCAAAACTGCCAGAGAAGAATATGCCTTCAACTGCAGCAAAGGCA 138796 Query 48285 GTAAGTCTCTCTCCGTAACTGGCT---TCGTTGTGTATCCACCGTTGTGCCCAATCAGCC 48341 | | | ||| | | ||||| | | || |||||| | ||||| |||||| Sbjct 138795 ATGATACGCTCAGCAAATGTGGCTGACTTGCTGGCAATCCACTTCAGGGCCCAGTCAGCC 138736 Query 48342 TTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 48387 |||||||| ||||| |||| ||||| |||||||| || || |||| Sbjct 138735 TTCTTCTTCACACAGGGCAGGGTTTCAATAGCATTGAACAGGAAGT 138690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660142690080