Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq33 654 0.0 >seq33 Length=1899332 Score = 654 bits (724), Expect = 0.0 Identities = 1223/1779 (69%), Gaps = 27/1779 (2%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||||||| || | | | ||||| || || |||| ||||||||| || |||| Sbjct 686939 CAACAGTGAACTGGATAGCATTTGCGGCTGGCTTCGTGCGTAAATAGTACATTCCCGTTT 686880 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 ||| |||| |||| | |||||||| || ||| | ||| |||| | || || | Sbjct 686879 TTAAGCCCATTTTCCACGCATAGAAATGAATAGATGTCAATTTACCATAATTTGGTTCAG 686820 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | | ||||||||| | || || || ||||| || || || ||||| ||||| ||||||| Sbjct 686819 CAACATGAATATTGAAGGATTGGCTCTGATCAATAAATGCCCCTCTGTCAGCAGCCATTT 686760 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 ||| | || ||| || | |||||| | |||||| | | | | ||||| | | Sbjct 686759 GTATTGTTGTTTTTACAGACACTTCCCAGACAGTTTTATATAAGTCCCTTATATCTTTAG 686700 Query 75612 GAA--GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 ||| | || |||||||||| ||||| || || || ||| || || || | Sbjct 686699 GAATTGCTTCAATATTTTGAATAGATCCATTATTGTGGATGATAAGATTTTTCATATCTT 686640 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 ||| ||| || | || |||||| ||| | | |||| ||||||||| ||| |||| Sbjct 686639 CATCCCATAAATCAGCTTCAGTTAAATCTCGTAACAAATGATGATTAACAACTTGGAATT 686580 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | || ||||| |||| || ||||| || ||| ||||||| | |||||||| | Sbjct 686579 CACCTGACAAGACTCGTCTCTGATAAATGTTGGAAGTAAATGGTTCAAATGATTCATTAT 686520 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 ||||||| ||||||||||| || ||||| ||||| || || | |||| |||||| | Sbjct 686519 TTCCCAATATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCTAA 686460 Query 75849 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908 |||||||| | ||||| ||||| || | ||||| ||| | |||| || Sbjct 686459 GACCATGTTTGGCAATTTTTTCTTTGAGTGACACCCAATTCCACAAGTCTGTGGGGGTTT 686400 Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGT 75968 || ||| | ||| ||||| | || || | || ||| | || | ||| || || | Sbjct 686399 TATTCCACATATCATATTGCAATATACCTTGACTGGCAGGACAGCCTTCATAAGTCTCAT 686340 Query 75969 AAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTT 76028 | || | ||| ||||||| || ||||| || |||| || || ||||||||||||| Sbjct 686339 AGACGCCATACTTCTCAGCTAACTCACAACTGGCTTCTAGTGCCCCATAATAAATTGTTT 686280 Query 76029 CGAAAATCTTCTTATTAAGATC--TTGC-GCTTCAAGACTATCAAAAGGATAATGTAAAA 76085 | || || | | ||| | | |||| || ||| || || |||| | | | | Sbjct 686279 CAAATATTTGTTGATTTAATTTAATTGCTGCCTCA---CTTTCGTAAGGTATACGCATTA 686223 Query 76086 GAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 76145 || ||||||||| |||| ||| || |||||||| || || |||| || ||| |||| | Sbjct 686222 AAACAAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTTG 686163 Query 76146 AAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGA 76205 | ||| || ||||| | || |||||||| | ||| ||||||||||| ||||| |||| Sbjct 686162 AGTTTTTTGCCTCTGGCACTGGATAATAATTTACATCAATAATTTTATTTAGATT-CTGA 686104 Query 76206 CAACTACT-TTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC---CATCTATCACA 76261 || | ||| || ||||||| |||| |||| | || || | || ||||| Sbjct 686103 GTTATAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGTTTTGTCCTCATTCACA 686044 Query 76262 AACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATAT 76321 |||||||| | ||| || ||||||||||| || || || || |||| | || ||| Sbjct 686043 AACATATTTAAAGCAATTGATGCTAGATTGCACACAGCCACTTCATCTGATGAGGTGTAT 685984 Query 76322 TGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTC 76381 | || || || ||||| | || || || || ||||| || | || | ||||||||| Sbjct 685983 TCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGTTGCTT 685924 Query 76382 TTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCG 76441 ||| | || ||||| || |||||||| | | |||||||| ||||||| |||| |||| Sbjct 685923 TTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTGCTTCG 685864 Query 76442 ATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTT--GTATCGCTTCTCTCTTT 76499 ||||||| |||||| | ||| |||| | | | | || | | || |||| ||| Sbjct 685863 ATAATAGCTTTCCAAAGAACTTGAGCTCTCACTT--GTTTCACGAAGCGACCCTCTTTTT 685806 Query 76500 CATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATT 76559 |||||| ||| || ||||||||| || |||||| || | | |||||||||| Sbjct 685805 CATATTTCTCATACAAAGCTTCAAATTCCTCACCCCAACAGTCTGCTAGTCCAGGACATT 685746 Query 76560 CATTCGGACACATCAATGACCACTCACCAT--CTTCCTTAACCCGTTTCATAAAGAGATC 76617 ||| || ||||| | ||| || || ||| || || | |||||| || | || Sbjct 685745 CATGGGGGCACATGATACTCCAATCTTGATTGCTTTCT--ACTCTTTTCATGAACAAGTC 685688 Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677 ||||||||||| |||| ||||| |||| || | |||||| || || || ||||| Sbjct 685687 AGGTATCCATAAAGCATAGAATAGCTCTCTGGCACGGACTTCTTCTTTCCCAGTGTTCTT 685628 Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737 ||| | ||| ||||| || | ||||||| |||||||||||||| ||||| || | | Sbjct 685627 TTTCAAATCAAGGAATTCAAATATATCAGCATGCCATGGTTCTAAGTATATGGCAAATGC 685568 Query 76738 ACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAA 76797 || |||| |||||||||||| || |||| ||||| |||||||| || || ||||| || Sbjct 685567 GCCGGGTCTTTTATTACCTCCTTGGTCTACATATCGAGCAGTGTTGTTGTACACTCTTAA 685508 Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857 ||| || | | || ||||| ||||||||| |||| |||||| |||| ||| | Sbjct 685507 CATGGGTACTAGACCATTAGAGACACCATTTGTACCAGCTATATAAGTTCCCTTTGCTCT 685448 Query 76858 AAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT 76915 ||| | | || || || ||||| || || || ||||| || || ||||| || Sbjct 685447 AATGCAGT-GTACATGA-AGACCTATCCCACCAGCTGACTTAGAAATGAGGGCACATTGT 685390 Query 76916 TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || || |||||||| || ||||| || ||||||||| |||| | |||||| || | Sbjct 685389 TTTAACGTGTCATAAATTCCCTCAATGCTATCATCCCTCATTGCTATAAGAAAGCATGAA 685330 Query 76976 GACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCAT 77035 || | ||| | | |||| |||| || | || ||| |||||| || || || Sbjct 685329 GATAATTGTGGTCGTGGAGTTGCTGCTGAGAAAAGAGTTGGACTTGCATGTGTAAAATAT 685270 Query 77036 TTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095 ||||| || || |||||||| || | ||| | | || || || ||| |||||| Sbjct 685269 TTTTCTGACAGAAGATTGTAGGTGTTTATAGCCCCCTCAATGTCTTCGCCATGTATTCCT 685210 Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 | || || ||||| | ||||||||| || | |||| || Sbjct 685209 ATAGAAACTCGCATGAGCATATGCTGTGGCCTTTCTGCA 685171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925515055040