Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1343 113 2e-20 >seq1343 Length=47657 Score = 113 bits (124), Expect = 2e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || || |||||||||||||| |||||||| || |||||| || | || | Sbjct 43651 GGTTTCTCTGTGGAAGGTCAAGAAAATATACAAGAAATATTGTCGAAACAGTTATACCTA 43592 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||||||| | ||| |||||| | | | | ||| || |||| ||| | ||| || Sbjct 43591 TGTCAATGTCTCGCTGCTTTGATGCTTGTTAGGACTGGAGGCCATTTTGTCGTAAAACTT 43532 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || ||| | || || | |||||||| ||| ||| | || | |||||||||| |||| || Sbjct 43531 TTTGATGTCTTCACTCTTTTTAGTGTTGGCTTAATTTACATCATGTATAGATGTTTTGAT 43472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276543572771425