Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1235 125 1e-24 >seq1235 Length=69449 Score = 125 bits (138), Expect = 1e-24 Identities = 176/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||||||||| |||||||| || ||||| |||||||| ||| | | |||| | | || Sbjct 25338 TCTTCGAGACAACATCCAGGGTATCACGAAGCCAGCCATCAGAAGATTGGCCAGAAGGGG 25397 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || || | | || ||||| | || ||||| | ||||| |||||| ||| | || Sbjct 25398 AGGCGTTAAAAGAATATCCGGATTAATTTACGAAGAAACTCGTGGTGTTTTAAAGGTTTT 25457 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | || |||| ||||| | ||| ||||||||||| ||| | |||||||| Sbjct 25458 CCTAGAAAATGTCATCCGAGATGCCGTGACCTACACCGAGCACGCGAAAAGAAAGACTGT 25517 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||||| | |||||||| ||||| | ||||| | | |||||||||| || Sbjct 25518 GACAGCTATGGACGTTGTCTATGCTTTGAAGAGACAAGGAAGGACTCTTTATGGTTTCGG 25577 Query 16693 AAGTTAA 16699 | | ||| Sbjct 25578 AGGCTAA 25584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072479936675