Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_006646.1 Length=31972 Score E Sequences producing significant alignments: (Bits) Value seq632 122 2e-23 seq1191 109 1e-19 seq1768 82.4 2e-11 >seq632 Length=94143 Score = 122 bits (134), Expect = 2e-23 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22927 TTTGGAATAACTTTTTAATGACTTTACCGATCGATTCCAAAAACTAATCAGCCCTTAACC 22986 ||||||||||||||| | | ||||| |||| | | |||||||||||| ||| || | | Sbjct 36991 TTTGGAATAACTTTTAACCGGCTTTATCGATTAACTTCAAAAACTAATCCGCCTTTGAGC 36932 Query 22987 TCGAAAAACCACGTCGATTGCCACCGGCCCGGCCAGAATCGGTTGATTCGTTCCGGAGAT 23046 | ||||||||||||| || |||||| | || |||||||||||||||||||| ||||| Sbjct 36931 TTGAAAAACCACGTCAATCGCCACCAAGCTGGTCAGAATCGGTTGATTCGTTCGAGAGAT 36872 Query 23047 ATCGT 23051 ||||| Sbjct 36871 ATCGT 36867 Score = 86.0 bits (94), Expect = 1e-12 Identities = 81/103 (79%), Gaps = 9/103 (9%) Strand=Plus/Minus Query 23702 CAGTCAAAAGTTATTGCAGTTTGAAAATTCATAAAATAAGTAGTGTTGGATGAAACTTCT 23761 || |||||||||||||| |||||||||||| |||| ||||||| ||||||||| | Sbjct 36730 CATTCAAAAGTTATTGCGGTTTGAAAATTCCAAAAA----TAGTGTTCTATGAAACTTTT 36675 Query 23762 ATCAGACTTTTGAGCTTAAATTAAAAAGCTCAAAAGCGTAGAA 23804 |||||||||| |||| | | | |||||||| || ||||| Sbjct 36674 ATCAGACTTTCGAGC-----TGAGAGAGCTCAAATGCATAGAA 36637 >seq1191 Length=55967 Score = 109 bits (120), Expect = 1e-19 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22927 TTTGGAATAACTTTTTAATGACTTTACCGATCGATTCCAAAAACTAATCAGCCCTTAACC 22986 ||||||||||||||| | ||||| |||| | | |||||||||||| ||| || | | Sbjct 12445 TTTGGAATAACTTTTAACCAGCTTTATCGATTAACTTCAAAAACTAATCCGCCTTTGAGC 12386 Query 22987 TCGAAAAACCACGTCGATTGCCACCGGCCCGGCCAGAATCGGTTGATTCGTTC 23039 | |||||||||||||||| |||||| | || |||||||||||||||||||| Sbjct 12385 TTGAAAAACCACGTCGATCGCCACCAAGCTGGTCAGAATCGGTTGATTCGTTC 12333 Score = 80.6 bits (88), Expect = 5e-11 Identities = 91/122 (75%), Gaps = 9/122 (7%) Strand=Plus/Minus Query 23702 CAGTCAAAAGTTATTGCAGTTTGAAAATTCATAAAATAAGTAGTGTTGGATGAAACTTCT 23761 || |||||||||||||| ||||| |||||| |||||| ||||| ||||||||| | Sbjct 12201 CATTCAAAAGTTATTGCGGTTTGGAAATTCCAAAAATA----GTGTTCTATGAAACTTTT 12146 Query 23762 ATCAGACTTTTGAGCTTAAATTAAAAAGCTCAAAAGCGTAGAACAGCTATCTTTTTGAGC 23821 |||||||||| |||| | | | |||| ||| || ||||| ||| | ||||| | Sbjct 12145 ATCAGACTTTCGAGC-----TGAGAGAGCTGAAATGCATAGAAATATTATTTCTTTGAAC 12091 Query 23822 TC 23823 || Sbjct 12090 TC 12089 >seq1768 Length=30625 Score = 82.4 bits (90), Expect = 2e-11 Identities = 80/103 (78%), Gaps = 9/103 (9%) Strand=Plus/Plus Query 23702 CAGTCAAAAGTTATTGCAGTTTGAAAATTCATAAAATAAGTAGTGTTGGATGAAACTTCT 23761 || |||||||||||||| ||||| |||||| |||||| ||||| ||||||||| | Sbjct 22382 CATTCAAAAGTTATTGCGGTTTGGAAATTCCAAAAATA----GTGTTCTATGAAACTTTT 22437 Query 23762 ATCAGACTTTTGAGCTTAAATTAAAAAGCTCAAAAGCGTAGAA 23804 |||||||||| |||| | | | |||||||| || ||||| Sbjct 22438 ATCAGACTTTCGAGC-----TGAGAGAGCTCAAATGCATAGAA 22475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102185189861300