Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2446 102 9e-17 >seq2446 Length=565066 Score = 102 bits (112), Expect = 9e-17 Identities = 223/328 (68%), Gaps = 7/328 (2%) Strand=Plus/Minus Query 131852 AAGATTAATCCTA-TGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGA 131910 |||| ||| | || ||||||| || ||||||||||||||| | ||| |||| | || Sbjct 540542 AAGACTAAGCTTAATGACTCCAGTATTACCTATGTTGGCTGAAGCTTGCAAATCAGTGGA 540483 Query 131911 AAAAGCAATAGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCG 131970 || ||||| | |||| | | ||||||| |||||| | |||||||| || || | Sbjct 540482 AATGGCAATGAAGAAATGTCCTAACGGAATGTTCTCAGAGATCAAATATGACGGTGAAAG 540423 Query 131971 TGTACAAATTCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGT 132030 |||||| | |||||||||| |||| | || ||||| |||| ||||||||||| Sbjct 540422 GGTACAAGTGCATAAAAAAGGGAATGAGTTTAAATATTTCTCTAGAGCATTAAAACCTGT 540363 Query 132031 TCTTACTCATAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAA 132089 | | | ||| ||| | | |||| | | | || | | | |||||||| | | | Sbjct 540362 TATGGCACAT-AAAGTCAGTCATTTTAAGGATTATTTACCACAAGCATTTCCAAAGGGGA 540304 Query 132090 AAAACTTCATTTTAGATGCGGAATTAATAATGATAGATACAAAATCA--AATTCATTTTT 132147 | || ||| | ||||| ||| | | ||| ||||| || || || | ||| Sbjct 540303 CCGATTTGATTCTTGATGCTGAAGTTTTGATGGTAGATGTGAATACAGGAAAGC--CTTT 540246 Query 132148 ACCATTTGGTTCATTAGGTATACATAAA 132175 ||||||||| || ||||||| |||||| Sbjct 540245 GCCATTTGGTACACTAGGTATCCATAAA 540218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531881019939000