Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2446 102 9e-17
>seq2446
Length=565066
Score = 102 bits (112), Expect = 9e-17
Identities = 223/328 (68%), Gaps = 7/328 (2%)
Strand=Plus/Minus
Query 131852 AAGATTAATCCTA-TGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGA 131910
|||| ||| | || ||||||| || ||||||||||||||| | ||| |||| | ||
Sbjct 540542 AAGACTAAGCTTAATGACTCCAGTATTACCTATGTTGGCTGAAGCTTGCAAATCAGTGGA 540483
Query 131911 AAAAGCAATAGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCG 131970
|| ||||| | |||| | | ||||||| |||||| | |||||||| || || |
Sbjct 540482 AATGGCAATGAAGAAATGTCCTAACGGAATGTTCTCAGAGATCAAATATGACGGTGAAAG 540423
Query 131971 TGTACAAATTCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGT 132030
|||||| | |||||||||| |||| | || ||||| |||| |||||||||||
Sbjct 540422 GGTACAAGTGCATAAAAAAGGGAATGAGTTTAAATATTTCTCTAGAGCATTAAAACCTGT 540363
Query 132031 TCTTACTCATAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAA 132089
| | | ||| ||| | | |||| | | | || | | | |||||||| | | |
Sbjct 540362 TATGGCACAT-AAAGTCAGTCATTTTAAGGATTATTTACCACAAGCATTTCCAAAGGGGA 540304
Query 132090 AAAACTTCATTTTAGATGCGGAATTAATAATGATAGATACAAAATCA--AATTCATTTTT 132147
| || ||| | ||||| ||| | | ||| ||||| || || || | |||
Sbjct 540303 CCGATTTGATTCTTGATGCTGAAGTTTTGATGGTAGATGTGAATACAGGAAAGC--CTTT 540246
Query 132148 ACCATTTGGTTCATTAGGTATACATAAA 132175
||||||||| || ||||||| ||||||
Sbjct 540245 GCCATTTGGTACACTAGGTATCCATAAA 540218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531881019939000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |