Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2205 113 5e-20 >seq2205 Length=656796 Score = 113 bits (124), Expect = 5e-20 Identities = 256/379 (68%), Gaps = 7/379 (2%) Strand=Plus/Plus Query 114275 aaaaTAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 114334 |||| |||| |||| || | |||||||| || | || || || || || |||||||| Sbjct 19911 AAAACAAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTT 19970 Query 114335 GACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393 || ||| || ||| ||| || ||| |||| ||| |||| |||||||||| | Sbjct 19971 GAGTTTTTTGCC-TCTGGCACTGGGTAATAATTTACATCAATAATTTTATTTAGATTCTG 20029 Query 114394 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 114453 || | | ||| || | ||| | | || | ||| | | | | || ||||| Sbjct 20030 AGTTATAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGTTT---TGTCCTCATT 20086 Query 114454 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG- 114512 ||| || || | || ||||| || ||||| ||||||| ||||| | || || Sbjct 20087 CACAAACATATTTAAAGCAATTGATGCTAGATTGCACACAGCCACTTCATC-TGATGAGG 20145 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 |||| |||| |||||| || ||||| || | ||||| || |||||||||||||| | Sbjct 20146 TGTATTCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGT 20205 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | ||| | || || | ||| || |||||||||||||| || || || || ||| | Sbjct 20206 TGCTTTTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTG 20265 Query 114633 ACTTGAGAATAGCCTTCCA 114651 | || |||||| ||||| Sbjct 20266 CTTCGATAATAGCTTTCCA 20284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597331385913000