Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2205 111 2e-19 seq1613 96.9 4e-15 >seq2205 Length=656796 Score = 111 bits (122), Expect = 2e-19 Identities = 188/271 (69%), Gaps = 5/271 (2%) Strand=Plus/Plus Query 110199 ATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTT 110258 ||| ||||||| || | |||||| || | ||| | | |||| | ||| | ||||| Sbjct 20018 ATTTAGATTCTGAGTTATAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGTTTT 20077 Query 110259 CGTCTCCTT-ATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCT 110317 ||| || | |||||||| | |||||| || || ||||||||||||| | Sbjct 20078 GTCCTCATTCACAAACATATTT----AAAGCAATTGATGCTAGATTGCACACAGCCACTT 20133 Query 110318 CGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCA 110377 | ||| ||||||||| | |||||| || ||||||||| | ||||| ||||| Sbjct 20134 CATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCA 20193 Query 110378 AGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAG 110437 ||||||| || || ||| ||||||| ||| ||||| ||||||||||| || || | Sbjct 20194 AGTTCTTTTGGTTGCTTTTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGTTCCTG 20253 Query 110438 TTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 |||| |||| | || ||| || ||||| Sbjct 20254 TTTCAACTTGTGCTTCGATAATAGCTTTCCA 20284 >seq1613 Length=46735 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/182 (72%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||| | ||| || |||||||| ||||| | ||||||||| | ||||| ||||| Sbjct 40320 TCATCTCTAGAAATCAGCTCATTGCTGAATGTCAATCCAGGCATCAATCCTCGCTTCTTC 40379 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 | ||||||||| | |||||| ||||| ||||| ||||| || ||| || || || Sbjct 40380 ATCCAAAAGATTGATGCAAAACTGCCAGAGAAGAATATGCCTTCAACAGCAGCAAAGGCA 40439 Query 119637 AATAGACGCTCAGCAAAAGGTCGAGACTTG---TCGAACCACTTGAGAGCCCAGTTGGCC 119693 | | |||||||||||| | |||||| | | ||||| ||| ||||||| ||| Sbjct 40440 ATGATACGCTCAGCAAATGTGGCTGACTTGCTTGCAATCCACTGGAGGGCCCAGTCAGCC 40499 Query 119694 TT 119695 || Sbjct 40500 TT 40501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588954097455000