Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq558 192 5e-43 seq1678 138 9e-27 seq806 131 1e-24 seq1608 129 5e-24 seq1008 125 6e-23 seq1179 116 3e-20 seq1280 102 7e-16 seq778 102 7e-16 >seq558 Length=411337 Score = 192 bits (212), Expect = 5e-43 Identities = 397/588 (68%), Gaps = 6/588 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||||||||||| || ||| |||||||| || ||||| ||||||| || || Sbjct 375055 GGAATTGATTTAGGAACTACCTATTCATGTGTTGGCGTCTGGCAGCATGGTAATGTGGAT 374996 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || || || ||||||||||| || | || ||||| |||||||| | ||||| || ||| Sbjct 374995 ATAATAGCTAATGATCAAGGGAATCGCACCACTCCCTCTTATGTCGCCTTCACTGATACT 374936 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | ||||||| | || ||| | || | || ||||| | ||||| ||| Sbjct 374935 GAGAGGCTCATTGGTGACGGCGCGAAAAACCAGGTGGCTCTGAATCCAAGTAATACAATT 374876 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| ||||| | || || ||| | | ||||| ||| ||||| |||| | Sbjct 374875 TTTGATGCCAAACGACTCATCGGTCGAAAATATGATGATCCGAAGATTCAGCAAGATCTC 374816 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 || |||||||| ||| || | || |||| ||||| || | || | | | || Sbjct 374815 AAACATTGGCCATTCAAAGTGGTCAATGAAGGCGGAAAGCCAAAGATCCAGGTTGAATAT 374756 Query 550298 GAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATG 550357 |||| ||||| || | || ||| |||| ||||| | || || ||| Sbjct 374755 AAAGGCAAAACTAAACGCTTCGCTCCTGAAGAAATCAGTAGCATGGTACTGATTAAGATG 374696 Query 550358 AAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCA 550417 ||| | || |||| | | || || ||| | | | || || ||||| ||||| Sbjct 374695 AAAGATGTCGCTGAAGCTTATTTGGGGAAACCAGTAAAGAAAGCGGTTATAACCGTACCG 374636 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || || || || || || ||| | |||||||| ||||| |||||| || || || || Sbjct 374635 GCTTACTTCAACGATTCTCAAAGACAAGCTACCAAAGACGCTGGAGCCATAGCCGGGCTG 374576 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || || | |||||||| |||||||| || |||||||| | || || ||| | |||||| Sbjct 374575 AACGTGTTGCGTATTATTAATGAACCAACAGCTGCTGCTTTAGCTTACGGATTAGATAAA 374516 Query 550538 CATAATGATCAA---GAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | ||| || |||| || || || ||||||||| ||||||| Sbjct 374515 -AACCTGA--AAGGCGAACGAAACGTGCTGATCTTTGATCTTGGAGGT 374471 Score = 138 bits (152), Expect = 9e-27 Identities = 522/808 (65%), Gaps = 12/808 (1%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT-ATCATGGTGTGTTG 551847 |||||| |||| |||||||||||||| || || | ||| || || | | || | | Sbjct 374405 TGGAGACACTCACCTTGGTGGCGAAGACTTCGACAGTAGGCTTGTCAATTTCCTG-GCCG 374347 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG-CTCTTCGTCGT 551906 | || |||||| | ||| | ||| ||| | ||| | |||||| ||||| | ||| Sbjct 374346 ACGAATTTAAAAGGAAACATAAAAAAGATTTGAATAC-TAACCCAAAGTCTCTTAGACGT 374288 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 || |||| || ||| ||||| |||||| | | || || ||||| || | | || Sbjct 374287 CTTCGAACCGCGGCCGAGAGAGCAAAACGAACCTTGTCCTCCAGTACTGAAGCGAGCATC 374228 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 || | || | | | ||| || || || | | | | | || || || || Sbjct 374227 GAGATTGACGCGCTGTATGAAGGCATAGACTTTTTCTCACGAGTGTCTAGAGCTCGCTTC 374168 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | ||||| | || | | |||| | ||||| ||||| ||| | | | Sbjct 374167 GAAGAATTGAACTCTGACTTATTCCGTACAACACTCGAACCTGTAGAGAAAGCTCTGAAT 374108 Query 552087 GATTCAAAGATTGATAAA--TCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 ||| | || | || || | | | | ||||| || || | ||||||||||| ||| Sbjct 374107 GATGCCAAACTGGACAAGAGTGCTA--TTCATGACATCGTTTTGGTTGGTGGATCCACAC 374050 Query 552145 GAATTCCTAAAATTCGCGAAATG--TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | || || ||||| | ||| | | | ||| || ||| ||||| || || || Sbjct 374049 GTATCCCCAAAATACA-GAATTTACTGCAAAACTTCTT-CAACGGTAAGAAGTTGAACTT 373992 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | ||||| ||||| || ||||| |||||||| ||| ||||||| ||||| ||| Sbjct 373991 GTCTATAAATCCTGATGAAGCAGTTGCATATGGTGCAGCAGTTCAAGCTGCTATACTTAG 373932 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 ||| || | | || | ||| | || | || || ||||| ||||| ||||| | Sbjct 373931 CGGAGAACGTCACTCGAAGATCCAAGACGTTCTGCTGGTTGATGTCGCTCCTTTATCTTT 373872 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | || || | || || ||||||| | | | || | || | | || || Sbjct 373871 GGGTATCGAGACTGCCGGTGGAGTTATGACGGCTATAGTAGAACGTAACGCAAAAATACC 373812 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 ||| ||| | |||| ||| |||||| ||| ||||| || | || || || ||||| Sbjct 373811 TTGCAAACATTCTCAAACCTTTACTACGTTTTCTGATAACCAGTCAGCCGTCACCATTCA 373752 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTT 552502 | ||| |||||||||||| | | || || | || || | || || || || | | Sbjct 373751 AGTTTACGAAGGAGAAAGAGCAATGACAAAGAACAACAACCTGCTGGGAACGTTCGACCT 373692 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 || || ||||| ||||||||||| || || ||||| || || | |||||| | || Sbjct 373691 GACTGGCATCCCTCCAGCTCCTCGTGGTGTGCCACAAATAGACGTGGCATTCGATTTAGA 373632 Query 552563 TGCCAATGGAATTTTGAATGTGACTGCT 552590 ||| || || ||| | || || ||||| Sbjct 373631 TGCTAACGGCATTCTCAACGTATCTGCT 373604 >seq1678 Length=290781 Score = 138 bits (152), Expect = 9e-27 Identities = 243/351 (69%), Gaps = 10/351 (3%) Strand=Plus/Plus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 ||| || || || |||||||||||||| ||||||||||| | |||| ||||||||||| Sbjct 198425 AGTCTTCGACTGTTGGTTTGAATCAGGATCTATGCCTTACGCTCAATGTCATTATCCATT 198484 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATC 368912 ||| ||| ||| | ||||| | | | || || || |||| | | ||| Sbjct 198485 TGAAAACAAAAAGGAGTTTGAGGAAGTT-----TTCCCTG-CTAATTTCATTGCTGAAGG 198538 Query 368913 AATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGA 368972 |||||||||||| | |||||||||||||| || | || ||||| ||||| | || | Sbjct 198539 TATTGATCAAACAAGAGGTTGGTTTTATACTCTTATTGTCTTATCAACAGCACTGTTTAA 198598 Query 368973 TAAACCGGCTTTTAAAAATGTAATAGTAACTGG--TATTGTTAATGCATCTGATGGTCAA 369030 |||||| | ||||| || | || | | ||| || ||||| || |||||||| ||| Sbjct 198599 AAAACCGCCATTTAAGAACCTTATCGCTAATGGTTTAGTGTTA--GCTTCTGATGGGCAA 198656 Query 369031 AAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGGT 369090 || ||||| || || ||| || || | |||||| | | || ||| | |||| Sbjct 198657 AAAATGTCGAAGAGAAAGAAGAACTACCCTGATCCTCTTGAAGTTATAACTAAGTATGGT 198716 Query 369091 GCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAA 369141 || ||| |||| ||| | || || || || || || || ||||| ||| Sbjct 198717 GCCGATGCTTTAAGACTTTATCTTGTGAATTCTCCAGTGGTGAAAGCGGAA 198767 >seq806 Length=81131 Score = 131 bits (144), Expect = 1e-24 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || | |||||| || ||| || |||||||||||| | ||||| | | ||| Sbjct 45887 AGAACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGAAAGAGTGCGTCCGTCT 45946 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 ||||| || || || || ||||| | |||||| ||||| || |||||||| ||||| ||| Sbjct 45947 TCAAGCTGCTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATTCCCTCTTTGTCT 46006 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 |||||||| ||| || |||||||| |||| | | | ||| | |||| ||| Sbjct 46007 TGAATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACTTCTAATGTAATGGTT 46066 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||||| | |||||| || ||||||||||| Sbjct 46067 TTACCAGTTAAAGTTTTCACAAAAATTTGCAT 46098 Score = 118 bits (130), Expect = 9e-21 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || |||||||| ||| || || |||||||| || | ||||| Sbjct 48644 CTGAGACGCAGCACGAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGAGTG 48703 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| | |||||||||||| || || | ||| || ||||| |||||||| ||| Sbjct 48704 CGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGGAATGCCT 48763 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 || ||||||||||||||| ||| || ||||| ||||||| Sbjct 48764 TCCTTATCTTGAATTTTTGCTTTAACGTTTTCAATGGTATCAG 48806 Score = 104 bits (114), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 ||| | ||| | ||||||||| |||||| |||||||| || | || || | | Sbjct 48421 ACGCAATACTAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCTGATAATGTGCGTCC 48480 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| | ||||| |||||||| || | || |||||||||||| || || || || || Sbjct 48481 ATCTTCCAACTGTTTGCCGGCAAAGATCAATCGTTGCTGATCAGGTGGGATACCCTCCTT 48540 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAAC 563438 ||| || ||||| ||| || || ||||| |||| | | || | ||| | Sbjct 48541 ATCCTGGATTTTGGCTTTAACATTTTCGATTGTGTCAGAAGGCTCAACCTCTAAAGTGAT 48600 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| ||||| | ||||| ||||||||||||||| Sbjct 48601 GGTTTTGCCAGTCAATGTTTTTACGAAAATTTGCATA 48637 Score = 102 bits (112), Expect = 7e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| | ||||| || ||| || |||||||||||||| | |||| Sbjct 47963 AGACGAAGTACCAAGTGAAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAGGTTCGC 48022 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || | ||| || ||||| || || | || || || || || ||||| ||||| Sbjct 48023 CCATCCTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATACCTTCC 48082 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || |||||||| ||| || |||||||| |||| | | | ||| || || Sbjct 48083 TTGTCCTGAATTTTAGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACTTCTAGTGTG 48142 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||| || ||||| | |||||| ||||| ||||||||| Sbjct 48143 ATAGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATA 48181 Score = 95.1 bits (104), Expect = 1e-13 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||| ||||||| ||||| | ||| || | ||||| || || || || |||| Sbjct 48227 ATATTATAATCAGAAAGAGTGCGGCCATCCTCTAACTGTTTGCCTGCGAAGATCAGTCGC 48286 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||| || || ||||| ||||| ||||| || ||||| ||| || |||||||| Sbjct 48287 TGCTGGTCTGGGGGAATACCTTCCTTATCCTGTATTTTGGCTTTGACATTTTCAATTGTG 48346 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 |||| | | ||| | ||| | ||||||||||| | |||||| ||||| |||||| Sbjct 48347 TCAGACGGCTCAACTTCTAAAGTTATTGTTTTACCAGTTAAAGTTTTTACGAATATTTGC 48406 Query 563473 AT 563474 || Sbjct 48407 AT 48408 >seq1608 Length=32450 Score = 129 bits (142), Expect = 5e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || |||||||| ||| || ||| ||||| |||| || || | Sbjct 29837 AGACGCAGGACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAGAGGGTGCGC 29778 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || |||||||| || || |||||||| || || || || |||||| Sbjct 29777 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATACCTTCT 29718 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || |||||||||||| || || ||| || ||||| | | |||||| ||| Sbjct 29717 TTGTCTTGAATTTTTGCCTTAACATTCTCGATAGTATCTGAAGGCTCGACTTCGAGGGTA 29658 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || ||||||||||| |||||||||||||| |||||| Sbjct 29657 ATTGTCTTACCAGTAAGCGTTTTAACGAAAATCTGCATA 29619 Score = 129 bits (142), Expect = 5e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||||||| |||||| || |||||||||| || || | Sbjct 30749 AGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAAAGGGTACGC 30690 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || || || ||||| ||||| | ||||| || || |||||||| ||| Sbjct 30689 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCCTCT 30630 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 ||||||||||| || ||| || |||||| || |||| | | || ||| ||||| Sbjct 30629 TTATCTTGAATCTTAGCTTTCACATTCTCAATAGTGTCAG-AAGGCTCCACTTCAAGAGT 30571 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||||||||| || || || |||||||| |||||| Sbjct 30570 GATGGTTTTACCAGTGAGGGTCTTCACGAAAATCTGCATA 30531 Score = 107 bits (118), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||| ||||| ||| |||||| || ||||| |||| || || | Sbjct 29610 GAGACGCAGAACAAGGTGAAGCGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTGCG 29551 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| | || ||||| || || || |||| |||||||| || ||||| ||||| Sbjct 29550 ACCGTCTTCTAACTGCTTTCCAGCGAAGATCAGTCGCTGCTGATCTGGGGGAATGCCTTC 29491 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| ||||||||||| |||||| ||||| || || | | | ||| || || Sbjct 29490 TTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGATGGCTCAACTTCAAGGGT 29431 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||||||| || | ||||| || ||||| ||||| Sbjct 29430 GATAGTTTTACCCGTCAAGGTTTTCACAAAAATCTGCAT 29392 Score = 107 bits (118), Expect = 2e-17 Identities = 152/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| ||| || ||| || || || | ||||| | | |||||||| Sbjct 30510 CAAG-TGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGTCCATCTTCAA 30452 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || || || ||||| ||||| | ||||| ||||| ||||||||||| || ||||| | Sbjct 30451 GCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGA 30392 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTA 563445 |||| ||||| ||||| ||||| | | | || ||| || || | |||||| Sbjct 30391 TTTTAGCCTTTACGTTTTCAATGGTATC-GGAAGGCTCCACTTCAAGGGTGATAGTTTTT 30333 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| | || || |||||||| |||||| Sbjct 30332 CCAGTCAATGTCTTTACGAAAATCTGCATA 30303 Score = 104 bits (114), Expect = 2e-16 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| ||||| | | ||||||||| ||||| ||||| || Sbjct 30266 TCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCATCTTCAAGCTGTTTGCCGGCGAAG 30207 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 ||||| | ||||| || || ||||||||||| || ||||| || || || || Sbjct 30206 ATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTAACATTT 30147 Query 563404 TCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 || || ||||||| | | ||| || || | ||||| ||||| || || || ||| Sbjct 30146 TCGATGGTATCAGAAGGTTCAACTTCTAGGGTGATGGTTTTTCCAGTGAGGGTCTTCACG 30087 Query 563464 AAAATTTGCATA 563475 |||||||||||| Sbjct 30086 AAAATTTGCATA 30075 Score = 102 bits (112), Expect = 7e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| ||||| | |||||| || || || ||||| || Sbjct 31178 TCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAG 31119 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 ||||| | ||||| || || |||||||| || || || || || || ||||| | Sbjct 31118 ATAAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTC 31059 Query 563404 TCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||||| || |||| | | || ||| ||||| | |||||||||||| || || || || Sbjct 31058 TCAATAGTGTCAGAAGGC-TCCACTTCAAGAGTGATAGTTTTACCAGTGAGGGTCTTCAC 31000 Query 563463 GAAAATTTGCATA 563475 ||||||||||||| Sbjct 30999 GAAAATTTGCATA 30987 Score = 102 bits (112), Expect = 7e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||||||||| | || || ||| ||||| || ||||| |||| ||||| | | Sbjct 31661 AGACGGAGTACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGT 31602 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || || || || ||||| | ||||| || || ||||||||||| Sbjct 31601 CCATCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCC 31542 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| ||||| || || || || ||||||| || || |||||| || Sbjct 31541 TTGTCTTGGATTTTAGCCTTAACGTTTTCGATGGTATCAGATGGCTCGAC-TTCGAGGGT 31483 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | |||||| ||||| | || || |||||||| |||||| Sbjct 31482 GATAGTTTTTCCAGTCAAGGTCTTCACGAAAATCTGCATA 31443 Score = 86.0 bits (94), Expect = 5e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| || || | ||||||||| ||||| || || || Sbjct 31406 TCTTTCTGAATGTTGTAGTCAGAAAGGGTACGCCCATCTTCAAGCTGTTTGCCAGCGAAG 31347 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 ||||| | ||||| || || ||||||||||| || ||||| || || || || Sbjct 31346 ATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTAACATTT 31287 Query 563404 TCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 || || ||||||| | |||||| || | |||||| ||||| | || || ||| Sbjct 31286 TCGATGGTATCAGAAGGCTCGACTTCGAGGGTGATAGTTTTTCCAGTCAAGGTCTTCACG 31227 Query 563464 AAAATTTGCATA 563475 ||||| |||||| Sbjct 31226 AAAATCTGCATA 31215 >seq1008 Length=68572 Score = 125 bits (138), Expect = 6e-23 Identities = 247/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 |||||||||||| | || || | | || | ||| | || || || || || |||||| Sbjct 2812 GATGCTAAACGTCTCATCGGCCGCAAATTCGAAGATGCCACCGTACAAGCCGACATGAAG 2871 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 || ||||||||| | |||| | || ||| || || | || ||| | ||||| | Sbjct 2872 CACTGGCCTTTCGAGGTTGTCAGTGACGGTGGTAAGCCAAAGATC-AAGGT-CTCATACA 2929 Query 550301 --GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGA 550358 ||| | ||| || | || || || || || ||||| | | ||||||| Sbjct 2930 AGGGAGAAGACAAAACCTTCTTCCCTGAGGAAGTTAGCTCAATGGTGCTCACAAAAATGA 2989 Query 550359 AACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGA-TGCAGTAATAACTGTACCA 550417 | |||||||| || | | | || ||| | | | | || ||||||||| || || ||| Sbjct 2990 AGGAAACAGCCGAGGCCTATCTCGG-CAAAACGGTGCAGAATGCAGTAATCACGGTTCCA 3048 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || || || || ||||||||| | ||||| || |||||||| || || |||| | Sbjct 3049 GCGTACTTCAACGACTCACAAAGACAAGCCACGAAAGATGCGGGTACCATCTCTGGCTTG 3108 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| ||||| ||||||||||| ||||||||||| |||| || || ||||| || Sbjct 3109 AACGTTCTCCGTATCATCAATGAACCGACTGCTGCTGCGATTGCGTACGGCCTTGACAA 3167 >seq1179 Length=339839 Score = 116 bits (128), Expect = 3e-20 Identities = 358/549 (65%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||| | || ||||| || || || || || ||||| |||| || Sbjct 266536 AGCCATCGGAATTGATCTTGGTACCACCTACTCCTGCGTCGGAGTATGGCAGCATGGAAA 266477 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || || ||||| || || || ||| | || || ||||| || || | ||||| Sbjct 266476 CGTGGAGATCATCGCCAACGACCAGGGCAACCGTACCACACCATCATACGTCGCCTTCAC 266417 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || | || | | | || ||||| || || | || | | | || |||| ||| Sbjct 266416 AGACTCCGAGCGACTCATCGGAGATGCTGCGAAGAACCAGGTCGCCCTCAACCCTAACAA 266357 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| || || ||||| | ||||| | | ||| | || ||| |||| Sbjct 266356 CACAGTTTTCGACGCAAAACGACTCATTGGCCGCAAGTTTGACGACCCGAAGATTCAACA 266297 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 || ||| | || ||||| ||| || || | || | | |||||| ||| | ||| ||| Sbjct 266296 GGACATGCAACACTGGCCCTTCAAAGTTATCAACGACTGTGGAAAGCCTAAAATTCAAGT 266237 Query 550291 T--ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTT-CATCTATGGTTTT 550347 | | ||| ||||| |||| ||| | || ||| |||| || | ||||| | Sbjct 266236 TGAATTCA--AAGGAGAAACGAAACGATTCGCGCCTGAAGAAATCAGCAGC-ATGGTACT 266180 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | || ||||| ||||||| || | | ||| ||| ||||||||||| Sbjct 266179 GACAAAGATGAAGGAAACAGCTGAAGCATACCTCGGTACCTCAGTGCGCGATGCAGTAAT 266120 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || || || || || |||||||| || || || |||||||| || || || Sbjct 266119 CACAGTCCCGGCTTACTTCAACGACTCACAGCGACAGGCCACTAAAGACGCCGGTGCCAT 266060 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||| || || ||||| || || || ||||| || || || || || || || || || || Sbjct 266059 TGCCGGGCTGAATGTACTGCGCATCATCAACGAGCCCACCGCCGCCGCCCTCGCCTACGG 266000 Query 550528 ACTTGATAA 550536 ||| || || Sbjct 265999 ACTCGACAA 265991 >seq1280 Length=51632 Score = 102 bits (112), Expect = 7e-16 Identities = 396/612 (65%), Gaps = 8/612 (1%) Strand=Plus/Plus Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTA-TTTCGAGGGCCAAATTT 552026 |||| || |||| | ||| || ||||| |||| || | | |||| || || || Sbjct 15983 AAGTGGAAGCATTGTGTGACGGGATTGACTATA-TAGGAAGAATTTCCAGAGCTCTCTTC 16041 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | || || ||| | || || | || | | ||| | ||| ||| ||||| Sbjct 16042 GAAGAATTATGCTCAGATTTATTCCGAGACACGTTGGGGCCAATTGAAAAAGCTTTAAAT 16101 Query 552087 GATTCAAAGATTGATAAA-TCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 ||| ||| || ||| ||| || | |||| | ||| | || || || || ||| || Sbjct 16102 GATGCAA-GACTGAAAAAATCTGACATACAGAAGATTATTCTAGTAGGGGGCAGTACTAG 16160 Query 552146 AATTCCTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 ||| || || |||| ||||| || || ||| | || || || || | | Sbjct 16161 AATACCAAAGATTCAAAGTATGTTGAAAGAATTCTTTGAC-GGAAAGAATTTGACAACTA 16219 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 || | ||||| ||||||||||| || | ||| || || |||||||| || ||| | | Sbjct 16220 GTTTGAATCCTGATGAGGCTGTGGCGTGTGGGGCTGCGATTCAAGCCGCCATTTTAAACG 16279 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 | || |||||||| || | | | |||| || |||||| |||||||| || | Sbjct 16280 GCCAGCGACATGAAAAAATAAGAGACCTATTACTAGTCGATGTTGTACCTCTATCCCTAG 16339 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 | |||| || | | |||| || ||| || | | || ||||| ||| | || |||| Sbjct 16340 GAGTAGAGACGGCTAGAGGGATGATGTTCAAAGTCGTAGAGAGAAACACTCCAATACCTT 16399 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 | | ||| | | | | | || | ||| |||||| | | ||||| | | Sbjct 16400 GCCAGAAAACCAAAGAAATAACCACTTTAGAAGACTATCAAAACCGTATGACAATAGAGA 16459 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA-ATTTA 552503 |||||||||| ||||||| || ||||| || |||||| || | | || || | || Sbjct 16460 TTTTTGAAGGTGAAAGAAGTTTAACTAAGGACAATAAT-TTGTTAGGAGTTATAGAATTG 16518 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 ||||| || ||||| || | || ||| | |||| || || ||||| || || || Sbjct 16519 ACTGGTATACCGCCTGCACCAAGAGGCGTAGCCAAAATAGATGTCACTTTTGACATAAAT 16578 Query 552564 GCCAATGGAATT 552575 || ||||| ||| Sbjct 16579 GCTAATGGGATT 16590 >seq778 Length=430494 Score = 102 bits (112), Expect = 7e-16 Identities = 396/612 (65%), Gaps = 8/612 (1%) Strand=Plus/Plus Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTA-TTTCGAGGGCCAAATTT 552026 |||| || |||| | ||| || ||||| |||| || | | |||| || || || Sbjct 425439 AAGTGGAAGCATTGTGTGACGGGATTGACTATA-TAGGAAGAATTTCCAGAGCTCTCTTC 425497 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | || || ||| | || || | || | | ||| | ||| ||| ||||| Sbjct 425498 GAAGAATTATGCTCAGATTTATTCCGAGACACGTTGGGGCCAATTGAAAAAGCTTTAAAT 425557 Query 552087 GATTCAAAGATTGATAAA-TCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 ||| ||| || ||| ||| || | |||| | ||| | || || || || ||| || Sbjct 425558 GATGCAA-GACTGAAAAAATCTGACATACAGAAGATTATTCTAGTAGGGGGCAGTACTAG 425616 Query 552146 AATTCCTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 ||| || || |||| ||||| || || ||| | || || || || | | Sbjct 425617 AATACCAAAGATTCAAAGTATGTTGAAAGAATTCTTTGAC-GGAAAGAATTTGACAACTA 425675 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 || | ||||| ||||||||||| || | ||| || || |||||||| || ||| | | Sbjct 425676 GTTTGAATCCTGATGAGGCTGTGGCGTGTGGGGCTGCGATTCAAGCCGCCATTTTAAACG 425735 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 | || |||||||| || | | | |||| || |||||| |||||||| || | Sbjct 425736 GCCAGCGACATGAAAAAATAAGAGACCTATTACTAGTCGATGTTGTACCTCTATCCCTAG 425795 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 | |||| || | | |||| || ||| || | | || ||||| ||| | || |||| Sbjct 425796 GAGTAGAGACGGCTAGAGGGATGATGTTCAAAGTCGTAGAGAGAAACACTCCAATACCTT 425855 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 | | ||| | | | | | || | ||| |||||| | | ||||| | | Sbjct 425856 GCCAGAAAACCAAAGAAATAACCACTTTAGAAGACTATCAAAACCGTATGACAATAGAGA 425915 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA-ATTTA 552503 |||||||||| ||||||| || ||||| || |||||| || | | || || | || Sbjct 425916 TTTTTGAAGGTGAAAGAAGTTTAACTAAGGACAATAAT-TTGTTAGGAGTTATAGAATTG 425974 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 ||||| || ||||| || | || ||| | |||| || || ||||| || || || Sbjct 425975 ACTGGTATACCGCCTGCACCAAGAGGCGTAGCCAAAATAGATGTCACTTTTGACATAAAT 426034 Query 552564 GCCAATGGAATT 552575 || ||||| ||| Sbjct 426035 GCTAATGGGATT 426046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029138668582750