Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2898 167 2e-36 seq1608 129 4e-25 seq2295 123 2e-23 seq2205 113 3e-20 seq806 107 1e-18 >seq2898 Length=111689 Score = 167 bits (184), Expect = 2e-36 Identities = 480/728 (66%), Gaps = 13/728 (2%) Strand=Plus/Minus Query 27701 GTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAGACAGTATCCGGCCAACAAA 27760 || || | ||||||||| ||||| ||||| || || || ||| || | | || Sbjct 28389 GTTGTTGGCGCTTACTTCGTCGAATGGGGCGTCTACCCCAGGAAGTTCCCCGTCGACCGC 28330 Query 27761 CTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGGCGGAGAC 27820 ||||||| || ||||| || ||| | |||||||| || | || || ||||| ||||| Sbjct 28329 GTACCCATCCCGAATCTTACCCATCTTCTGTACGGTTTCATCCCAATCTGCGGTGGAGAT 28270 Query 27821 GGTATCAACGATAGCCTAAAACAGATCCCCAATTCT--TTTGAGGTCCTCCAAAAGTCAT 27878 || |||||||| || | ||| | ||| || | || | | || ||| || | Sbjct 28269 GGCATCAACGACAGTTTGAAAGAAATCG--AAGGCAGCTTCCAAGCTCTGCAACGATCCT 28212 Query 27879 GCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTGCAAAAAC 27938 || | | | ||||| | || || ||||| |||| || || || |||| Sbjct 28211 GCAGTGGCAGGGAGGACTTCAAAGTATCGATTCACGACCCTTGGGCAGCTCTTCAGAAAC 28152 Query 27939 CGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAGTTGATGG 27998 | ||||||||| | | | | |||||||| || ||||||||||| || || ||| ||||| Sbjct 28151 CACAAAAGGGTCTGGCGTCCTGGAACGAACCCTACAAGGGTAATTTCGGACAGCTGATGA 28092 Query 27999 CCATCAAAC-GACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGGACTCTG 28057 | |||| | || | || |||| || | || || ||||||| ||||| ||| Sbjct 28091 TGTTGAAACAGGCAAGA-CCTGACCTGAAGATCTTACCTTCCGTTGGTGGTTGGACCCTG 28033 Query 28058 AGCGATCCATTCTTTTTTATGCAC-GACCCGGCCAAGCGTGCCGTGTTT-GTAGAGTCTG 28115 ||||||||||| || | ||| ||| || ||| | | | | || || || |||| Sbjct 28032 GCTGATCCATTCTTCTTCTT-CACTGACAAGGTTAAGAG-GAAGCGCTTCGTTGACTCTG 27975 Query 28116 TGCGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAGTTTC 28175 || || || || |||| ||||| |||||||| ||||| || | ||||||||||| | Sbjct 27974 TGAAGGACTTCCTTGAAACCTGGAAATTCTTTGATGGAGTGGACATTGACTGGGAGTTCC 27915 Query 28176 CGGGTGGAAAGGGAGCCAACCCCGCGATCGGTAACCCCGACATTGACGCAAAAACGTACA 28235 | ||||| ||||| || ||||| | |||||| ||| || ||||| | | ||| Sbjct 27914 CTGGTGGTAAGGGCGCTAACCCTGATCTCGGTAGCCCTGA---TGACGGTCACATCTACG 27858 Query 28236 CCGCGCTGTTGCGCGAACTAAGATTTATGCTGGACGAGTTGGCGGaaaaaaaCGATCGCG 28295 || |||| || ||||| ||| ||||| ||||| || | | || | | Sbjct 27857 TCGAGCTGATGAAGGAACTGAGAGAGATGCTTAACGAGCTGTCTGCCAAGACTGGAAAGA 27798 Query 28296 TCTACCAACTAACCACCGCTATTAGCGCCGGGCATGATAAAATACAAGTGGTCAACTACG 28355 ||| |||| || | || || ||| | || || || || || || || ||||| Sbjct 27797 AATACGAACTGACTTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTAGTAGACTACA 27738 Query 28356 CTTCGGCCCAAAAACATCTGGACCACATTTTCGTTATGAGTTACGATTTTAGGGGCGCCT 28415 |||| || | | |||||||||| ||| | ||||| ||||| || | ||| || | Sbjct 27737 AAGCGGCTCAGCAGTACATGGACCACATCTTCTTGATGAGCTACGACTTCAAGGGAGCTT 27678 Query 28416 GGTCCAAC 28423 |||| ||| Sbjct 27677 GGTCAAAC 27670 >seq1608 Length=32450 Score = 129 bits (142), Expect = 4e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||| || ||||| ||||| || | ||| |||| || |||||||| || || || Sbjct 29582 TCTTTTTGGATGTTGTAGTCAGACAGTGTGCGACCGTCTTCTAACTGCTTTCCAGCGAAG 29523 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||||||||| ||||| | ||||| ||| || ||||| ||| || ||||||| Sbjct 29522 ATCAGTCGCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTTACATTT 29463 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||| || || | || || ||||| |||||||| ||||| ||| Sbjct 29462 TCAATAGTGTCGGATGGCTCAACTTCAAGGGTGATAGTTTTACCCGTCAAGGTTTTCACA 29403 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 29402 AAAATCTGCAT 29392 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||||||| | || |||||| ||||| ||||| ||||| ||| | ||| Sbjct 31205 AGACGCAAAACCAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGA 31146 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| ||||| || || || ||||| || || | ||||| |||||| Sbjct 31145 CCATCTTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGAATTCCCTCC 31086 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| |||||| | | || || || | |||||| || | || Sbjct 31085 TTGTCCTGGATCTTGGCCTTTACATTCTCAATAGTGTCAGAAGGCTCCACTTCAAGAGTG 31026 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || || ||||| ||||| Sbjct 31025 ATAGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 30988 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||||||| || || |||||| ||||| ||||| ||||| || | || Sbjct 31433 AGACGCAAAACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGGGTACGC 31374 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || || || || || ||||| || || | ||||| || ||| Sbjct 31373 CCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCC 31314 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| || || | || Sbjct 31313 TTGTCTTGGATCTTGGCCTTAACATTTTCGATGGTATCAGAAGGCTCGACTTCGAGGGTG 31254 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||| || || || ||||||||||| Sbjct 31253 ATAGTTTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 31216 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || || || ||||| || || || || || | || Sbjct 30065 AGACGCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAAAGGGTACGC 30006 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| ||||| || || || ||||| || || | ||||| |||||| Sbjct 30005 CCATCTTCAAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCTGGGGGAATTCCCTCC 29946 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| |||||| | | || || || | ||| || || | || Sbjct 29945 TTATCCTGGATCTTGGCCTTTACATTCTCAATAGTGTCAGAAGGCTCAACTTCAAGAGTG 29886 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||| || || || ||||||||||| Sbjct 29885 ATGGTTTTTCCAGTCAATGTCTTCACGAAAATCTGCAT 29848 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || || || ||||| || || || || ||| | || Sbjct 30521 AGACGCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGT 30462 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || ||||| || || | ||||| || ||| Sbjct 30461 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATTCCTTCC 30402 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||||| | | | || || | |||||| || | || Sbjct 30401 TTGTCTTGGATTTTAGCCTTTACGTTTTCAATGGTATCGGAAGGCTCCACTTCAAGGGTG 30342 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||| || ||||| ||||||||||| Sbjct 30341 ATAGTTTTTCCAGTCAATGTCTTTACGAAAATCTGCAT 30304 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || || || ||||| || || ||||||||||| || | || Sbjct 30749 AGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAAAGGGTACGC 30690 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || ||||| || || | ||||| ||||| Sbjct 30689 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCCTCT 30630 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| ||| ||| | | || || || | |||||| || | || Sbjct 30629 TTATCTTGAATCTTAGCTTTCACATTCTCAATAGTGTCAGAAGGCTCCACTTCAAGAGTG 30570 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || || ||||||||||| Sbjct 30569 ATGGTTTTACCAGTGAGGGTCTTCACGAAAATCTGCAT 30532 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||| || || ||| || |||||||| ||||| ||||| || | || Sbjct 29837 AGACGCAGGACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAGAGGGTGCGC 29778 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| |||||||| ||||| | || || || | || | || || Sbjct 29777 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATACCTTCT 29718 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| ||| || ||| | | || ||||| | ||| || || | ||| Sbjct 29717 TTGTCTTGAATTTTTGCCTTAACATTCTCGATAGTATCTGAAGGCTCGACTTCGAGGGTA 29658 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | ||||| || ||||||||||| Sbjct 29657 ATTGTCTTACCAGTAAGCGTTTTAACGAAAATCTGCAT 29620 >seq2295 Length=223346 Score = 123 bits (136), Expect = 2e-23 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 7827 GCGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGC 7886 |||| ||| || || || ||||||||| | || ||| |||||| || | ||||| Sbjct 101914 GCGTTTGCGCAGTTTTAAAGACTGGCCGCGATGCATGCGGCAAAAACCAGAGGAACTTGC 101973 Query 7887 CGAAGCTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGG 7946 ||| ||||| || | |||||| || | || |||| ||| ||||||||||| || || || Sbjct 101974 CGAGGCTGGTTTCTTCTACACCGGTCAGGGGGATAAGACCAAGTGTTTCTATTGCGATGG 102033 Query 7947 GGGTCTCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGA 8006 ||| | ||||| ||||| | | || | || ||||| || |||||||||||||| || Sbjct 102034 CGGTTTGAAAGACTGGGAAAATGATGACGTGCCCTGGGAACAGCACGCGCGCTGGTTCGA 102093 Query 8007 TAAATGCGCATATGTCAAACTAGTCAAAGGGGAGGAATATGTTCAGAAGGTAATTACTGA 8066 | ||||| || || | || || || || || || || |||||||| || | || Sbjct 102094 TCGCTGCGCCTACGTGCAGCTGGTGAAGGGCCGCGAGTACGTACAGAAGGTGATGTCCGA 102153 Query 8067 AGCGTGCG 8074 || |||| Sbjct 102154 GGCCTGCG 102161 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 8145 GTGTAAAATTTGTTTTGAAAATAATCGTAACGTGTGCTTTGTTCCGTGCGGACATGTGGT 8204 ||||||||| |||| || | | | || ||||||||||| || ||||||||||| ||||| Sbjct 102277 GTGTAAAATCTGTTATGCAGAGGAGCGCAACGTGTGCTTCGTACCGTGCGGACACGTGGT 102336 Query 8205 GGCATGCGCCAAGTGCGCTTTAACCACGAACACGTGCCCAATGTG 8249 ||| ||||| |||||||| || | | ||| |||||| ||||| Sbjct 102337 GGCCTGCGCTAAGTGCGCGTTGGCGGCAGACAAGTGCCCGATGTG 102381 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 7597 GCCCGCAACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGCGCGTTTTGTAAA 7656 || || || || ||||||||| | || || |||| || || || || || || || ||| Sbjct 101639 GCTCGGAATGGATTTTATTATCTTGGCCGCGGAGATGAAGTACGCTGTGCATTCTGCAAA 101698 Query 7657 GTGGAAATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCATCGGAAGTGGGCA 7716 || ||||| ||| | ||||||||||| || ||||| | |||||||||| | ||||| Sbjct 101699 GTTGAAATTATGAGATGGGTCGAAGGCGATGATCCCGCCAAGGACCATCAGCGTTGGGCG 101758 Query 7717 CCGCAGTGTCCGTT 7730 || || || || || Sbjct 101759 CCACAATGCCCATT 101772 >seq2205 Length=656796 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| | |||||| || || ||| || ||||| || || || || || Sbjct 546111 CCTCCTCTCAGCCTGAGCACCAAGTGAAGAGTGGATTCCTTTTGGATGTTATAGTCTGAA 546170 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||||||| |||||||| || || || || || || || | ||| Sbjct 546171 AGAGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGA 546230 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||| ||||| || ||| |||||| | | || ||||| ||||||||| Sbjct 546231 ATGCCCTCTTTGTCCTGGATTTTTGCCTTTACATTCTCAATAGTGTCTGAAGCCTCCACC 546290 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 || | || || || || ||||||| |||||||| || |||||||| || Sbjct 546291 TCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATCTGCATTGT 546340 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| | ||| || || || ||| || || || || ||||| || || Sbjct 548975 CCTCCTCTCAGCCTAAGCACTAAGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAG 548916 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||||||| |||||||| || || || || || || || | || Sbjct 548915 AGTGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGG 548856 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||| ||||| ||||||| || ||| | | || || || ||||||||| Sbjct 548855 ATGCCCTCTTTGTCCTGAATCTTTGCCTTCACATTCTCAATAGTGTCCGAAGCCTCCACC 548796 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 || | || || || || ||||||| |||||||| || || ||||| || Sbjct 548795 TCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATTTGCATTGT 548746 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || | ||| || || ||||| ||||| | || || | || || || Sbjct 554339 CACCAAGTGGAATGTGGATTCCTTCTGAATGTTGTAGTTTGAGAGTGTGCGGCTATCTTC 554280 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 |||||| |||||||| || || || || || || || | || | | ||| ||||| Sbjct 554279 CAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGGATGTTCTCTTTGTCCTG 554220 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||| ||| || ||| | | || ||||| ||||||||||| | ||||| || || Sbjct 554219 AATATTTGCCTTCACATTCTCAATAGTGTCTGAAGCCTCCACCTCGAGGGTAATGGTATT 554160 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 ||||||| |||||||| || || ||||| || Sbjct 554159 ACCCGTCAGGGTTTTTACGAAGATTTGCATTGT 554127 >seq806 Length=81131 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || |||| ||| | ||| || || ||| || || |||||||| || || Sbjct 48638 CCACCTCTGAGACGCAGCACGAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAA 48697 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || ||||| || || ||||| || |||| || ||||||||| | ||| Sbjct 48698 AGAGTGCGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGGA 48757 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| ||||| || ||| ||| ||| || | | | || || | |||||| Sbjct 48758 ATGCCTTCCTTATCTTGAATTTTTGCTTTAACGTTTTCAATGGTATCAGAGGGTTCCACC 48817 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| ||||||||||| || ||||| |||||||| Sbjct 48818 TCTAATGTTATGGTTTTCCCCGTCAAAGTCTTCACAAAGATCTGCAT 48864 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 || ||||| || || || ||||||||||||||||| || ||| | || |||| || Sbjct 45890 ACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGAAAGAGTGCGTCCGTCTTCA 45949 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| || || |||| || |||||||| | |||| ||||| ||||| | Sbjct 45950 AGCTGCTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATTCCCTCTTTGTCTTGA 46009 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || ||| ||| | | | || || | || || || | ||||| ||||| Sbjct 46010 ATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACTTCTAATGTAATGGTTTTA 46069 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| |||||||| ||||| Sbjct 46070 CCAGTTAAAGTTTTCACAAAAATTTGCAT 46098 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | ||||| || || ||| || || ||||||||||||||||| Sbjct 47954 CCACCACGTAGACGAAGTACCAAGTGAAGAGTGGATTCCTTCTGAATATTGTAATCAGAC 48013 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | |||| | || ||||| ||||| ||||| || |||| ||||||||| || | |||| Sbjct 48014 AAGGTTCGCCCATCCTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGA 48073 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||| || ||| ||| | | | || || | || || Sbjct 48074 ATACCTTCCTTGTCCTGAATTTTAGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACT 48133 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || || ||||||||||| || || || ||||| Sbjct 48134 TCTAGTGTGATAGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCAT 48180 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || ||||| |||||||| ||| | || | || || Sbjct 48200 ACCAAGTGGAGAGTTGACTCCTTCTGGATATTATAATCAGAAAGAGTGCGGCCATCCTCT 48259 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||| || || || || ||||||||||| || || | ||||| || ||||| || || Sbjct 48260 AACTGTTTGCCTGCGAAGATCAGTCGCTGCTGGTCTGGGGGAATACCTTCCTTATC-CT- 48317 Query 48678 ATCTTTTG--TTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTT 48735 | ||||| ||| ||| | | | || |||| ||| || || | || || |||| Sbjct 48318 GTATTTTGGCTTTGACATTTTCAATTGTGTCAGACGGCTCAACTTCTAAAGTTATTGTTT 48377 Query 48736 TTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || || ||||||||||| || || ||||| Sbjct 48378 TACCAGTTAAAGTTTTTACGAATATTTGCAT 48408 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| || || || | || ||||| | ||| || || ||||||||||||||||| Sbjct 46099 GCCGCCTCTAAGACGGAGGACTAAATGCAACGTAGATTCCTTCTGAATATTGTAATCAGA 46158 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | |||| | || ||||| ||||| ||||| || |||| || |||||| || | || Sbjct 46159 CAATGTTCGTCCATCCTCCAATTGCTTGCCGGCGAAGATCAATCTCTGTTGGTCTGGAGG 46218 Query 48659 AACGCCCTCCTTGTC 48673 || || |||||||| Sbjct 46219 AATACCTTCCTTGTC 46233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380923788035925