Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1613 145 1e-29 >seq1613 Length=46735 Score = 145 bits (160), Expect = 1e-29 Identities = 137/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||||||||| |||||||| ||||| |||||||| ||||||||| ||||| || Sbjct 40782 GTACATCTCAGAGTGAACATTCTCCATAGCAATCTGGAATCCGTAGAAGCATCTGGCTTC 40841 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||| ||||| ||| |||||| | |||| || ||||||||||| || ||||| || Sbjct 40842 TGTCACTTGCACCTCTTGGGAGAAGCGTTCCACCAAGTTCTCATTGACAATGCCATCAGA 40901 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA 48598 ||||||||||| || || |||||||| | ||| || | ||| ||| ||||| Sbjct 40902 CGCAGCAAAGAAAGCCAGCACATGTTTGATGAAGTGTCTCTCACTGTCCTTGAGA 40956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931498158624000