Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2205 152 6e-32 >seq2205 Length=656796 Score = 152 bits (168), Expect = 6e-32 Identities = 490/746 (66%), Gaps = 17/746 (2%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||||| |||||| || || |||| || || ||||| ||||| |||||||| || | Sbjct 20286 TTTGGAAAGCTATTATCGAAGCACAAGTTGAAACAGGAACTCCATACATGCTTTATAAAG 20227 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 || | || || | || || ||||||||||| ||||| || || || || || | | Sbjct 20226 ATTCATGCAATAGAAAAAGCAACCAAAAGAACTTGGGTACTATTAAATGCAGCAACTTGT 20167 Query 75996 GCACGGAAATTTTAGAGTACA-CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCA 76054 |||| |||||| |||| |||| | || | ||||| |||||| |||||| | |||||| Sbjct 20166 GCACTGAAATTGTAGAATACACCTCATCA-GATGAAGTGGCTGTGTGCAATCTAGCATCA 20108 Query 76055 ATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCAT 76114 || || | | || ||| ||||| || | || | | ||| ||| | | Sbjct 20107 ATTGCTTTAAATATGTTTGTGAATGAGGACA---AAACATATAATTTCACCAAATTAAAG 20051 Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 ||| | || |||| | | || | |||||||| | | ||||| ||||| ||| || Sbjct 20050 GAAGTTACTAAGACTATAACTCAGAATCTAAATAAAATTATTGATGTAAATTATTACCCA 19991 Query 76175 GT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 || ||| || ||| || |||||| | ||| |||| || || | || || ||||| Sbjct 19990 GTGCCAGA-GGCAAAAAACTCAAATATGAGGCACCGACCCATCGGAATTGGAGTCCAAGG 19932 Query 76234 TCTCGCGGATGTATTTATTTT-GTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA 76292 | || |||| |||| |||| ||| ||| | | || || | ||| | | Sbjct 19931 ATTAGCTGATGCATTTGTTTTAATGCGTATAC-CTTACGAAAGTGAGGCAGCAATTAAAT 19873 Query 76293 TGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGG 76352 | ||| | || |||||||| || ||| | | | || || || |||||||| || | Sbjct 19872 TAAATCAACAAATATTTGAAACAATTTATTATGGGGCACTAGAAGCCAGTTGTGAGTTAG 19813 Query 76353 CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTC 76412 |||| | || ||||||||| | ||| || | ||| || ||||| | | | Sbjct 19812 CTGAGAAGTATGGCGTCTATGAGACTTATGAAGGCTGTCCTGCCAGTCAAGGTATATTGC 19753 Query 76413 AGTTTGATATGTGGGAAGGTGAAACCAAGCTCA-ACT--ACGACTGGGATGT-TCTCAAG 76468 | | |||||||||| | | ||||| | || ||| || | || ||| ||||| Sbjct 19752 AATATGATATGTGGAA---TAAAACC-CCCACAGACTTGTGGAATTGGGTGTCACTCAAA 19697 Query 76469 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 ||| || | | |||||| | || || || | || ||||||||||| || Sbjct 19696 GAAAAAATAGCCAAACATGGTCTTAGAAATTCCCTATTATTAGCTCCAATGCCAACTGCA 19637 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 ||||| || ||||| ||||| |||||||||| |||||||||| || | ||||| || Sbjct 19636 TCCACTGCTCAAATATTGGGAAATAATGAATCATTTGAACCATTTACTTCCAACATTTAT 19577 Query 76589 CTGAGAAGAACCCTCGCAGGTGAGTT 76614 | ||| || | | ||||||| || Sbjct 19576 CAAAGACGAGTCTTGTCAGGTGAATT 19551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596547415068000