Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq806 165 1e-35
seq1608 95.1 2e-14
seq1613 91.5 2e-13
>seq806
Length=81131
Score = 165 bits (182), Expect = 1e-35
Identities = 181/237 (76%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| || ||||| ||||| |||||||||||||| ||| |||
Sbjct 46098 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACCCTCT 46039
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || ||| ||||| ||||| ||||| || || || ||||| |||
Sbjct 46038 GACACAATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCACCAGATCAA 45979
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| || ||||||||||| ||||| | ||| | || ||||| |||
Sbjct 45978 CAAAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACTCTTTCCGATTACAAT 45919
Query 156003 ATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAA 156056
|| || |||| | | || ||||||||||| |||| || ||||| || |||||||
Sbjct 45918 AT-TCAAAAGGAATCAACACTTCATTTAGTTCTAAGGTTGAGAGGTGGAATGTAAAA 45863
Score = 116 bits (128), Expect = 5e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | |||||||||||||| ||||| || || ||||| || || ||||
Sbjct 48636 ATGCAAATTTTCGTAAAAACATTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCT 48577
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| ||||| || ||||| || || || || || || ||
Sbjct 48576 GACACAATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAGGGTATCCCACCTGATCAG 48517
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| ||||||| | |||||| || ||| | |||||| | || |||||||| || |||
Sbjct 48516 CAACGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGACGCACATTATCAGACTACAAT 48457
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| ||||| | || ||||| ||||| ||
Sbjct 48456 ATCCAAAAAGAATCTACCCTTCACTTAGTATT 48425
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||||||||| | ||||| || ||||| ||||| || || |||||||| || ||
Sbjct 48409 AATGCAAATATTCGTAAAAACTTTAACTGGTAAAACAATAACTTTAGAAGTTGAGCCGTC 48350
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | ||| ||| || ||| |||||||| ||||| ||||| || || ||||| ||
Sbjct 48349 TGACACAATTGAAAATGTCAAAGCCAAAATACAGGATAAGGAAGGTATTCCCCCAGACCA 48290
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| || |||| | || || || ||| | || ||| | | ||| | || ||||||||
Sbjct 48289 GCAGCGACTGATCTTCGCAGGCAAACAGTTAGAGGATGGCCGCACTCTTTCTGATTATAA 48230
Query 156002 TAT 156004
|||
Sbjct 48229 TAT 48227
>seq1608
Length=32450
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || |||||||||||||||||||| || | ||||| || |||
Sbjct 30304 ATGCAGATTTTCGTAAAGACATTGACTGGAAAAACTATCACCCTTGAAGTGGAGCCTTCC 30363
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| || |||||| ||||| || ||||| || || || || ||
Sbjct 30364 GATACCATTGAAAACGTAAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 30423
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||| || |||||||| |||||| | ||| | || || |||||
Sbjct 30424 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACTCTTTCCGACTATAAC 30483
Query 156003 AT 156004
||
Sbjct 30484 AT 30485
Score = 93.3 bits (102), Expect = 6e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| | ||||| ||||| || |||||||| || | ||||| || ||
Sbjct 29391 AATGCAGATTTTTGTGAAAACCTTGACGGGTAAAACTATCACCCTTGAAGTTGAGCCATC 29450
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | |||| ||| || ||| ||||| ||||| ||||||||||| || ||||| ||
Sbjct 29451 CGACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGCATTCCCCCAGATCA 29510
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977
|| || |||| | || || |||||| | |||||
Sbjct 29511 GCAGCGACTGATCTTCGCTGGAAAGCAGTTAGAAGA 29546
Score = 89.7 bits (98), Expect = 8e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || ||||||||||||||||| || | |||||||| |||
Sbjct 31444 ATGCAGATTTTCGTGAAGACCTTGACTGGAAAAACTATCACCCTCGAAGTCGAGCCATCT 31503
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || |||||| || |||||| ||||| || ||||| || || ||||| ||
Sbjct 31504 GATACCATCGAAAACGTTAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 31563
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | || || |||||||| |||||| | ||| | || || || ||
Sbjct 31564 CAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACTCTTTCTGACTACAAC 31623
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| |||||| | || || || || ||
Sbjct 31624 ATCCAGAAAGAGTCTACTCTGCACTTGGT 31652
Score = 86.0 bits (94), Expect = 9e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || | ||||||||||| || || ||||||| ||| ||||
Sbjct 30076 ATGCAAATTTTCGTGAAGACCCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCTTCT 30135
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || ||| || || || || ||||| || ||||| || || ||||| ||
Sbjct 30136 GATACCATCGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 30195
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||||| || ||||| |||||| | ||| | || || || ||
Sbjct 30196 CAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGACGCACTCTTTCTGACTACAAC 30255
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| |||||| |||| || ||||| || ||
Sbjct 30256 ATTCAGAAAGAGTCGACTCTGCATTTGGTTTT 30287
>seq1613
Length=46735
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18422 TCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCT 18481
||| | || || ||||| || | ||| || ||||| ||||| || | | ||||||||
Sbjct 40753 TCTCTAATGTATGTGTCAATGAGCAAGGAGTACATCTCAGAGTGAACATTCTCCATAGCA 40812
Query 18482 ATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCT 18541
||||| || | || || |||| || || | ||| | ||| | || | |||
Sbjct 40813 ATCTGGAATCCGTAGAAGCATCTGGCTTCTGTCACTTGCACCTCTTGGGAGAAGCGTTCC 40872
Query 18542 ACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATG 18601
||||| |||||||| || || || |||| | || || || |||| |||| ||| |||
Sbjct 40873 ACCAAGTTCTCATTGACAATGCCATCAGACGCAGCAAAGAAAGCCAGCACATGTTTGATG 40932
Query 18602 AAATGTTTTTCATTATCCTTGAGATTGTTCCATTC 18636
|| ||| | ||| | ||||||||||| | ||| ||
Sbjct 40933 AAGTGTCTCTCACTGTCCTTGAGATTCTCCCAGTC 40967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731844783510000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |