Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2898 215 4e-51 seq806 172 4e-38 seq1608 156 3e-33 seq2205 132 4e-26 seq2295 113 3e-20 >seq2898 Length=111689 Score = 215 bits (238), Expect = 4e-51 Identities = 743/1142 (65%), Gaps = 30/1142 (3%) Strand=Plus/Minus Query 44929 GTTAACAAGGGCGGTAAATTTGACATGTCAATAAAAGTATGTAACTCAGATGGTTGT-GC 44987 ||||| ||||| |||| || | ||| | || || | || ||| | ||||| ||| || Sbjct 28560 GTTAAGAAGGGTGGTAGATACCAAATGAAAGTAGAACTCTGCAACGCTGATGGATGTAGC 28501 Query 44988 CACGAGCAAACCGGTTGCGGTCAAGATTGCCGACACTGACGGGTCGCATCTTGAT-CCAT 45046 || ||| || | || | | | ||||||| |||||||| | || |||| || | Sbjct 28500 TAC-AGCGAATCTACTGAGATAGTGGTTGCCGATACTGACGG-TAGCCACTTGCCACCCT 28443 Query 45047 TGCCGTACGA-ATGGCAAGAAAACAACAAGCCCTATGAAATAGGTACCACTGACAAAACT 45105 || ||| || | | || | |||||||||| | || || || ||| ||| | Sbjct 28442 TGGACTACTCTATCGGA-GAGAGGAACAAGCCCT-TCAAGCAG--ACTTCTGGCAAGGTT 28387 Query 45106 GTCGCCGCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTG 45165 || | |||||| ||||| |||||||| || || | || || || | ||||||| Sbjct 28386 GTTGGCGCTTACTTCGTCGAATGGGGCGTCTACCCCAGGAAGTTCCCCGTCGACCGCGTA 28327 Query 45166 CCAGTGCCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGC 45225 || | ||||| ||||| ||| | | |||||||| || || || |||||||| |||||| Sbjct 28326 CCCATCCCGAATCTTACCCATCTTCTGTACGGTTTCATCCCAATCTGCGGTGGAGATGGC 28267 Query 45226 ATTAATGACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCC 45285 || || |||||| | ||| || |||||| || |||| ||||| ||| ||| Sbjct 28266 ATCAACGACAGTTTGAAAGAAATCGAAGGCAGCTTCCAAGCTCTGCAACGATCCTGCAGT 28207 Query 45286 GGCCGCTCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAA 45345 ||| | || |||||||| ||||||||||| ||||| ||| | || ||||||||| Sbjct 28206 GGCAGGGAGGACTTCAAAGTATCGATTCACGACCCTTGGGCAGCTCTTCAGAAACCACAA 28147 Query 45346 AAAGGCGTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTGTA 45405 || || | | | ||||||||||| || || || ||||| ||||| | ||| | Sbjct 28146 AAGGGTCTGGCGTCCTGGAACGAACCCTACAAGGGTAATTTCGGACAGCTGATGATGTTG 28087 Query 45406 AAACGGGCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCGAT 45465 |||| ||||| ||| | | || | || || || |||| || ||||| ||| | ||| Sbjct 28086 AAACAGGCAAGACCTGACCTGAAGATCTTACCTTCCGTTGGTGGTTGGACCCTGGCTGAT 28027 Query 45466 CCGTTTTAC-----CATTTGCACGATGCGGAGAAACGCGCTTTGTTTGTGGAATCCGTGC 45520 || || | | || | || | | ||| || |||||| ||| || || ||| Sbjct 28026 CCATTCTTCTTCTTCACTGACAAGGTTAAGAGGAA-GCGCTTCGTT----GACTCTGTGA 27972 Query 45521 GCGAATT--TTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCC 45578 || || || || || |||||||| ||||| ||||| || || || |||||||| || Sbjct 27971 AGGACTTCCTTGAA--ACCTGGAAATTCTTTGATGGAGTGGACATTGACTGGGAGTTCCC 27914 Query 45579 CGGCGGCAATGGCGCCAATCC--ATCGGTGGGCGATCCAGAACGCGACGGTCTCACTTAT 45636 || || || ||||| || || ||| | || || || ||||||| || || Sbjct 27913 TGGTGGTAAGGGCGCTAACCCTGATC--TCGGTAGCCCTGA---TGACGGTCACATCTAC 27859 Query 45637 GTAGCACTGCTGCGCGATTTGCGCGACATGCTCGATCAATTGGCGCACGAAACCGGTCGG 45696 || | ||| || || || | || ||||| | | || | | | || || | Sbjct 27858 GTCGAGCTGATGAAGGAACTGAGAGAGATGCTTAACGAGCTGTCTGCCAAGACTGGAAAG 27799 Query 45697 CGCTACGAACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCGCTTTGGTAGATTAT 45756 |||||||||||| | || || ||| | ||| ||||| || | ||||| || Sbjct 27798 AAATACGAACTGACTTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTAGTAGACTAC 27739 Query 45757 CAAGACGCGCAAACTTATCTCGATCGAATCTTTTTAATGACGTATGATTTTAAAGGCGCT 45816 ||| || || || | || | ||||| || |||| || || || || || ||| Sbjct 27738 AAAGCGGCTCAGCAGTACATGGACCACATCTTCTTGATGAGCTACGACTTCAAGGGAGCT 27679 Query 45817 TGGTCGAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCCAGAATGGAATCGCGAC 45876 ||||| ||| | | ||||| ||| | ||| || |||| || | ||||| | | | Sbjct 27678 TGGTCAAACGACACTCTTGGCCACCAAGCTGCCCTGCACGCTCCCGCCTGGAACCCCAAG 27619 Query 45877 GAGCGTTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAAACGGGTAAAGCCTCAA 45936 ||| ||||||| |||| || || | | || | | | | || | ||| | Sbjct 27618 GAGACTTACACAACTGACTTCGGTGTCAAATTCCTGTTGGCTCAGGGAGTCAGCCCTAAG 27559 Query 45937 AAAATCGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGGAGTAATTAACTATCAA 45996 ||||| || | || || || |||||||| || || ||||| ||||| | || || Sbjct 27558 AAAATTGTCGTTGGTGTAGCTATGTACGGCCGTGGTTGGACTGGAGTCAACGGTTACAAA 27499 Query 45997 GACGACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGGCACTTGGGAAGACGGT 46056 |||| ||||| || || || | || || || || || || || ||| | || ||| Sbjct 27498 GACGGAAACCCATTCACTGGTGTAGCCACTGGCCCGGTCAAAGGTACCTGGCAGGATGGT 27439 Query 46057 GT 46058 || Sbjct 27438 GT 27437 >seq806 Length=81131 Score = 172 bits (190), Expect = 4e-38 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || || |||||||| || ||||| |||||||| || ||||| | Sbjct 45871 TCCACCTCTCAACCTTAGAACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGA 45930 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||||| || || || || || ||||| | ||||||||||| ||||| || || Sbjct 45931 AAGAGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGG 45990 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||||||||| |||||| | ||||||| |||| | |||||||| |||| | Sbjct 45991 AATTCCCTCTTTGTCTTG-AATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAA 46049 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| | || || ||||| |||||||| ||||| ||||| || ||||| Sbjct 46050 CTTCTAATGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 46098 Score = 150 bits (166), Expect = 1e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | |||||||| || || ||||| || ||||||||||| || || || || | Sbjct 48409 TCCTCCGCGCAAACGCAATACTAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCTGA 48468 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || | |||||||| ||| | ||||||| ||||||||| || || Sbjct 48469 TAATGTGCGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAATCGTTGCTGATCAGGTGG 48528 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| || || || | ||| ||| ||| |||| | ||||||||| | || || Sbjct 48529 GATACCCTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATTGTGTCAGAAGGCTCAAC 48588 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||||||||| || ||||| || || || ||||| Sbjct 48589 CTCTAAAGTGATGGTTTTGCCAGTCAATGTTTTTACGAAAATTTGCAT 48636 >seq1608 Length=32450 Score = 156 bits (172), Expect = 3e-33 Identities = 167/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | |||||||| ||||||||||| ||||| || || | | |||||| Sbjct 29607 ACGCAGAACAAGGTGAAGCGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTGCGACC 29548 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | || || ||||| | |||| || |||||||| || ||||| || ||||| Sbjct 29547 GTCTTCTAACTGCTTTCCAGCGAAGATCAGTCGCTGCTGATCTGGGGGAATGCCTTCTTT 29488 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||| ||| |||| | |||||| || | || |||||||| || | Sbjct 29487 GTCTTG-AATTTTGGCTTTTACATTTTCAATAGTGTCGGATGGCTCAACTTCAAGGGTGA 29429 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||| || || |||||||| ||||| ||||||||| Sbjct 29428 TAGTTTTACCCGTCAAGGTTTTCACAAAAATCTGCATT 29391 Score = 156 bits (172), Expect = 3e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| ||||| ||||| || |||||||| || ||||| ||||| | | Sbjct 30758 CCACCTCGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAA 30699 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||||||| | || | | ||||| || || ||| Sbjct 30698 AGGGTACGCCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 30639 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| ||||| ||| || | ||| ||| | || | |||||||||| | || || Sbjct 30638 ATTCCCTCTTTATCTTG-AATCTTAGCTTTCACATTCTCAATAGTGTCAGAAGGCTCCAC 30580 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||| || ||||| ||||| | ||| || || || |||||||| Sbjct 30579 TTCAAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAAATCTGCAT 30532 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| |||| ||||| |||||||| ||||||||||| || || | Sbjct 29846 CCACCTCGCAGACGCAGGACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAG 29787 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||| ||| | |||| |||||||| || || || Sbjct 29786 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGG 29727 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| |||||||| || ||| | || | ||| || ||| | || || Sbjct 29726 ATACCTTCTTTGTCTTG-AATTTTTGCCTTAACATTCTCGATAGTATCTGAAGGCTCGAC 29668 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || || ||||| | |||||||| || |||||||| Sbjct 29667 TTCGAGGGTAATTGTCTTACCAGTAAGCGTTTTAACGAAAATCTGCAT 29620 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||| ||||| ||||| || ||||| || ||||||||||| || | | Sbjct 30530 CCACCTCGCAGACGCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAA 30471 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||||||| | || | | ||||| || || ||| Sbjct 30470 AGAGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGA 30411 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| || || |||| | || || ||| | || ||| Sbjct 30410 ATTCCTTCCTTGTCTTGGATTTTAGCCTTTACGTTTTCAATGGTATCGGAAGGCTCCACT 30351 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || |||||||| ||||| || || || || || |||||||| Sbjct 30350 TCAAGGGTGATAGTTTTTCCAGTCAATGTCTTTACGAAAATCTGCAT 30304 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||| |||||||| || || || ||||| |||||||| || || | | Sbjct 31442 CCACCTCGCAGACGCAAAACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAGTCAGAA 31383 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || ||||||||||| | || | | ||||| || || ||| Sbjct 31382 AGGGTACGCCCATCTTCAAGCTGTTTGCCAGCGAAGATAAGACGCTGCTGGTCTGGGGGA 31323 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | || || ||| |||| | || |||||| | || ||| Sbjct 31322 ATTCCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCGATGGTATCAGAAGGCTCGACT 31263 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| ||||| ||||| || || || |||||||| Sbjct 31262 TCGAGGGTGATAGTTTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 31216 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||| ||||| ||||| || ||||| || ||||||||||| || | | Sbjct 30074 CCACCTCGCAGACGCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAA 30015 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||| || | || | | ||||| || || ||| Sbjct 30014 AGGGTACGCCCATCTTCAAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCTGGGGGA 29955 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| || || || | || || ||| | || | |||||||||| | || ||| Sbjct 29954 ATTCCCTCCTTATCCTGGATCTTGGCCTTTACATTCTCAATAGTGTCAGAAGGCTCAACT 29895 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || ||||| ||||| || || || || || |||||||| Sbjct 29894 TCAAGAGTGATGGTTTTTCCAGTCAATGTCTTCACGAAAATCTGCAT 29848 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||| |||||||| | || || ||||| |||||||| || || | | Sbjct 31214 CCACCTCGCAGACGCAAAACCAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCAGAA 31155 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||| || | || | | ||||| || || ||| Sbjct 31154 AGAGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGA 31095 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || || ||| | || | |||||||||| | || ||| Sbjct 31094 ATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTCTCAATAGTGTCAGAAGGCTCCACT 31035 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| |||||||| ||||| | ||| || || || || ||||| Sbjct 31034 TCAAGAGTGATAGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 30988 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||| ||||| ||||| || ||||| || ||||||||||| || | | Sbjct 30986 CCACCACGCAGACGCAAAACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAA 30927 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || || ||||| | || | | ||||| || || ||| Sbjct 30926 AGGGTACGCCCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGA 30867 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || || ||| |||| | || ||||| |||| ||| Sbjct 30866 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTTTCAATGGTATCAGATGGTTCAACT 30807 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| ||||| | ||| || || || || ||||| Sbjct 30806 TCTAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 30760 >seq2205 Length=656796 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| | |||||||| ||||| |||||||| ||||| |||||||| || | | Sbjct 546111 CCTCCTCTCAGCCTGAGCACCAAGTGAAGAGTGGATTCCTTTTGGATGTTATAGTCTGAA 546170 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | ||||| || || | || | | |||||| || |||||| Sbjct 546171 AGAGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGA 546230 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | |||| || ||| | || | |||||| ||| || || Sbjct 546231 ATGCCCTCTTTGTCCTGGATTTTTGCCTTTACATTCTCAATAGTGTCTGAAGCCTCCACC 546290 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || || || || || || || || | |||||| || || ||||||||| || Sbjct 546291 TCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATCTGCATTGTA 546341 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| | ||||| || || || |||||||| || || ||||| || || | Sbjct 548975 CCTCCTCTCAGCCTAAGCACTAAGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAG 548916 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | ||||| || || | || | | |||||| || ||||| Sbjct 548915 AGTGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGG 548856 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || ||| |||| || ||| | || | |||||| ||| || || Sbjct 548855 ATGCCCTCTTTGTCCTG-AATCTTTGCCTTCACATTCTCAATAGTGTCCGAAGCCTCCAC 548797 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || || || || || || || || | |||||| || || || |||||| || Sbjct 548796 CTCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATTTGCATTGTA 548745 >seq2295 Length=223346 Score = 113 bits (124), Expect = 3e-20 Identities = 180/256 (70%), Gaps = 7/256 (3%) Strand=Plus/Plus Query 89705 GCTCGGTTGCGCACTTTTGAACGCAACTGGCCTTGCGCTT--TGAAACAAAAACCTGAGC 89762 || || ||||||| |||| || ||||||| ||| | || |||||||| ||| Sbjct 101912 GCGCGTTTGCGCAGTTTTAAAG---ACTGGCC--GCGATGCATGCGGCAAAAACCAGAGG 101966 Query 89763 AGTTGGCGGATGCCGGttttttttACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTT 89822 | | || || || ||||| || ||||| || || || || ||||| | ||||||| || Sbjct 101967 AACTTGCCGAGGCTGGTTTCTTCTACACCGGTCAGGGGGATAAGACCAAGTGTTTCTATT 102026 Query 89823 GCAACGGGGGCCTTAAGGATTGGGAAGATGGCGATGAACCTTGGGAACAACATGCGCGCT 89882 || | || || | || || |||||| ||| || | || |||||||| || ||||||| Sbjct 102027 GCGATGGCGGTTTGAAAGACTGGGAAAATGATGACGTGCCCTGGGAACAGCACGCGCGCT 102086 Query 89883 GGTTTGATAATTGCATCTATGTTCAACTAGTAAAAGGACGCGATTACGTGCAAAATGTTA 89942 |||| ||| ||| ||| || || || || || || ||||| ||||| || || || | Sbjct 102087 GGTTCGATCGCTGCGCCTACGTGCAGCTGGTGAAGGGCCGCGAGTACGTACAGAAGGTGA 102146 Query 89943 TTTCGAACGCTTGCGT 89958 | || | || ||||| Sbjct 102147 TGTCCGAGGCCTGCGT 102162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385205232794475