Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq2898 194 2e-44
seq806 136 4e-27
seq2205 134 1e-26
seq1608 131 2e-25
>seq2898
Length=111689
Score = 194 bits (214), Expect = 2e-44
Identities = 348/503 (69%), Gaps = 4/503 (1%)
Strand=Plus/Plus
Query 19020 GGGTTAGCGCCATTGCCGCCTGGAAACTCCCAATCAATATCGACGCCATCGAAGAATTTC 19079
||||||||||| || || || || |||||||| ||||| || || ||||| |||||||||
Sbjct 27893 GGGTTAGCGCCCTTACCACCAGGGAACTCCCAGTCAATGTCCACTCCATCAAAGAATTTC 27952
Query 19080 CACGTTTCTAGATACTCTTGGACTGAATCGATAAACGTCTGCCGTACGATCTTGTC-GTG 19138
|| ||||| || | || | || || || | || || || | |||||| |||
Sbjct 27953 CAGGTTTCAAGGAAGTCCTTCACAGAGTCAACGAAGCGCTTCCTCTTAACCTTGTCAGTG 28012
Query 19139 CATATGGTAAAATGGGTCCGAAAGTGTCCAGCCCCCGATCGAAGGTAGCACTTTTAGATG 19198
| | | | ||||| || | || ||||| || || | ||||||| | || || |
Sbjct 28013 AAGAAGA-AGAATGGATCAGCCAGGGTCCAACCACCAACGGAAGGTAAGATCTTCAGGTC 28071
Query 19199 AGGGTTCGCCAATTTGGCTGCCATAAGTTGGCCAAAGTTGCCTTTGTACGGTTCGTTCCA 19258
||| | ||| ||| ||| || || || || || || ||||| |||||||||||
Sbjct 28072 AGGTCTTGCCTGTTTCAACATCATCAGCTGTCCGAAATTACCCTTGTAGGGTTCGTTCCA 28131
Query 19259 TG-CGCTGACACCTTTTTGGGGTTTCTGTATGGCCGCCCAAGGATCGTGAATGGCCACTT 19317
| ||| | ||| ||||| |||||||| | || |||||||| |||||||| | ||||
Sbjct 28132 GGACGC-CAGACCCTTTTGTGGTTTCTGAAGAGCTGCCCAAGGGTCGTGAATCGATACTT 28190
Query 19318 TGAAGTCGGCACGACCGGCACACGAACGTTGCAACGCTTCGAAACTGCCCGGGACAGTTT 19377
||||||| | | || || || ||||||| |||| ||| ||||| || ||
Sbjct 28191 TGAAGTCCTCCCTGCCACTGCAGGATCGTTGCAGAGCTTGGAAGCTGCCTTCGATTTCTT 28250
Query 19378 TGAGGGCATCATTGATGCCGTCGCCACCGCACATGGGCACGAAACCGTACAACAAATGCG 19437
| | || |||||||| || |||||||| || || | ||||||||||| | ||| |
Sbjct 28251 TCAAACTGTCGTTGATGCCATCTCCACCGCAGATTGGGATGAAACCGTACAGAAGATGGG 28310
Query 19438 ACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGTCGCGGATACACACCCCATTCGA 19497
| ||||| |||| || |||||||| |||| | || || || ||||||||||
Sbjct 28311 TAAGATTCGGGATGGGTACGCGGTCGACGGGGAACTTCCTGGGGTAGACGCCCCATTCGA 28370
Query 19498 CAAAGTATGCACCTATAATCTTG 19520
| ||||| || || | || ||||
Sbjct 28371 CGAAGTAAGCGCCAACAACCTTG 28393
>seq806
Length=81131
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||| || |||||||| ||||| |||| |||||||||||||| || ||||| ||
Sbjct 48410 CCTCCGCGCAAACGCAATACTAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCTGAT 48469
Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
| ||||| || | ||||| | ||||| || ||| |||||| ||||||||||| || ||
Sbjct 48470 AATGTGCGTCCA-TCTTCCAACTGTTTGCCGGCAAAGATCAATCGTTGCTGATCAGGTGG 48528
Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363
|| || || || || ||||| ||| | | ||| | ||||| | || || ||
Sbjct 48529 GATACCCTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATTGTGTCAGAAGGCTCAAC 48588
Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | || ||||| ||||||||||||||||| |||||||||
Sbjct 48589 CTCTAAAGTGATGGTTTTGCCAGTCAATGTTTTTACGAAAATTTGCATA 48637
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261
||||||||||| ||| ||||| ||||| || ||||||||| | |||| ||||||
Sbjct 45889 AACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGAAAGAGTGCGTCCGTCTTC 45948
Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321
|| || |||||||| | |||| | ||| ||||| || || || || ||||||||
Sbjct 45949 AAGCTGCTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATTCCCTCTTTGTCTTG 46008
Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381
|||||| ||| | | ||| | ||||| | |||||| ||||| | || | || ||
Sbjct 46009 AATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACTTCTAATGTAATGGTTTT 46068
Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || || ||||| || || ||||||||
Sbjct 46069 ACCAGTTAAAGTTTTCACAAAAATTTGCAT 46098
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| | ||||| || | ||||| ||||| || || || || ||||| |||
Sbjct 48638 CCACCTCTGAGACGCAGCACGAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAA 48697
Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
| |||| || | ||||| | |||||| || || |||||| | || |||||||||||
Sbjct 48698 AGAGTGCGTCCA-TCTTCCAATTGTTTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGG 48756
Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363
|||||||| || || ||||||| ||| | | ||| | || || | |||||| ||
Sbjct 48757 AATGCCTTCCTTATCTTGAATTTTTGCTTTAACGTTTTCAATGGTATCAGAGGGTTCCAC 48816
Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | || || || ||||| || || || || || |||||
Sbjct 48817 CTCTAATGTTATGGTTTTCCCCGTCAAAGTCTTCACAAAGATCTGCAT 48864
>seq2205
Length=656796
Score = 134 bits (148), Expect = 1e-26
Identities = 307/456 (67%), Gaps = 7/456 (2%)
Strand=Plus/Plus
Query 151005 AACTGGCCTCGAGCGCAGCATGATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGG 151064
||||||| || || || ||| ||| | |||||| ||||||| ||| ||| || |
Sbjct 19822 AACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTTGTTGATTTAATTTAATTG 19881
Query 151065 CAGCATCGCTCACGTACGGTATGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGC 151124
| || || || |||| ||||| |||| | |||||||||||| || || ||||| | |
Sbjct 19882 CTGCCTCACTTTCGTAAGGTATACGCATTAAAACAAATGCATCAGCTAATCCTTGGACTC 19941
Query 151125 CTATGCCGATGGGACGATGGCGCATATTAGAtttttttGCAGTTTCAATAGGGTAGAAAT 151184
| || |||||||| || || | |||||| || |||||||| | | ||||| |||
Sbjct 19942 CAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCCTCTGGCACTGGGTAATAAT 20001
Query 151185 TGCGATCAATAATTTTATTCAAACTATTCACTACATGTTTGACCACAGTGTGCAA-TAGT 151243
| ||||||||||||||| | | | | || | || || | || | |
Sbjct 20002 TTACATCAATAATTTTATTTAGATTCTGAGTTATAGTCTTAGTAACTTCCTTTAATTTGG 20061
Query 151244 TGAAAATCAAAAG---TATCATTATTGATATATTTATTGACGGCAATCGACGCTAGATTA 151300
|| |||| | | | | || | ||| | | | |||| | ||||| || ||||||||
Sbjct 20062 TG-AAATTATATGTTTTGTCCTCATTCACAAACATATTTAAAGCAATTGATGCTAGATTG 20120
Query 151301 CATACGGCAGTTTCGTCGGGCGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCAT 151360
|| || || ||| || | | | |||| ||| ||||| | ||||| |||||||||
Sbjct 20121 CACACAGCCACTTCATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAGTTGCTGCAT 20180
Query 151361 TTTATCAATCCGCAA-TTACTTTGATTGCTTTTGCGGTTGCAAGCGTCCTTGTATAACAT 151419
|| || | | | ||| || |||| |||||||| | ||||| | || || || | |||
Sbjct 20181 TTAAT-AGTACCCAAGTTCTTTTGGTTGCTTTTTCTATTGCATGAATCTTTATAAAGCAT 20239
Query 151420 GTACGGTGTGCCGGTTTCGGCTTGAATTTCTATAAT 151455
||| || || || ||||| |||| ||| |||||
Sbjct 20240 GTATGGAGTTCCTGTTTCAACTTGTGCTTCGATAAT 20275
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262
||||| || | ||| ||||| || || |||||||| || | ||||| |||||
Sbjct 548957 ACTAAGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGTGTGCGGCCATCTTCC 548898
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
| |||||||| || |||| ||||||||||| || || || ||||| |||||||| |
Sbjct 548897 AACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGGATGCCCTCTTTGTCCTGA 548838
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
|| ||| || | | || | ||||| | | || || || | || | |||||
Sbjct 548837 ATCTTTGCCTTCACATTCTCAATAGTGTCCGAAGCCTCCACCTCGAGGGTGATGGTCTTA 548778
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| |||| ||||||||||| ||||||||
Sbjct 548777 CCCGTCAGGGTTTTTACGAAGATTTGCAT 548749
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262
|| || |||| || ||||| ||||| ||||| || || | |||| |||||
Sbjct 546129 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTATAGTCTGAAAGAGTGCGGCCATCTTCC 546188
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
| |||||||| || |||| ||||||||||| || || || ||||| ||||||||
Sbjct 546189 AACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGAATGCCCTCTTTGTCCTGG 546248
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
|||||| |||| | || | ||||||| | || || || | || | |||||
Sbjct 546249 ATTTTTGCCTTTACATTCTCAATAGTGTCTGAAGCCTCCACCTCGAGGGTGATGGTCTTA 546308
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| |||| ||||||||||| || |||||
Sbjct 546309 CCCGTCAGGGTTTTTACGAAGATCTGCAT 546337
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262
|| || || | ||| ||||| || || |||||||| | | | |||| |||||
Sbjct 562494 ACCAAGTGGAATGTGGATTCCTTCTGAATGTTGTAGTTTGTGAGAGTGCGGCCATCTTCC 562435
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
| |||||||| || |||| ||||||||||| || || || |||| |||||||| |
Sbjct 562434 AACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGGATGCTCTCTTTGTCCTGA 562375
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
|| ||| || | | || | ||||||| | || ||||| | | | |||||
Sbjct 562374 ATCTTTGCCTTCACATTCTCAATAGTGTCTGAAGCCTCCACTTCGAGGGCGATAGTCTTA 562315
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| |||| ||||||||||| ||||||||
Sbjct 562314 CCCGTCAGGGTTTTTACGAAGATTTGCAT 562286
>seq1608
Length=32450
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | ||||| ||| | |||| |||||||||||||| |||||||| || |
Sbjct 29618 CCACCACGGAGACGCAGAACAAGGTGAAGCGTAGATTCTTTTTGGATGTTGTAGTCAGAC 29559
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||||| |||||| | || || ||||| ||||||| || |||||||| || ||
Sbjct 29558 AGTGTGCGACCGTCTTCTAACTGCTTTCCAGCGAAGATCAGTCGCTGCTGATCTGGGGGA 29499
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||||||||| |||||| ||||| | ||| | ||||| | || || |||
Sbjct 29498 ATGCCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGATGGCTCAACT 29439
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | || || || ||||| ||||| || || || |||||
Sbjct 29438 TCAAGGGTGATAGTTTTACCCGTCAAGGTTTTCACAAAAATCTGCAT 29392
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||| | ||||| || | |||| || ||||| ||||| |||||||| ||
Sbjct 29846 CCACCTCGCAGACGCAGGACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAG 29787
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| | ||||| || || || || ||| ||||||| | |||||| || || ||
Sbjct 29786 AGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGG 29727
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||||||||| ||||||| || | | || | || |||| || || |||
Sbjct 29726 ATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTCTCGATAGTATCTGAAGGCTCGACT 29667
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | || | ||||| || || | ||||| ||||| || ||||||
Sbjct 29666 TCGAGGGTAATTGTCTTACCAGTAAGCGTTTTAACGAAAATCTGCATA 29619
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||| | ||||| || || |||| ||||||||||| || |||||||||||
Sbjct 30758 CCACCTCGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAA 30699
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | | ||||| || || || |||||| |||| ||||| ||||| || || ||
Sbjct 30698 AGGGTACGCCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 30639
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || ||||| || ||| || ||| | | || | ||||| | || || |||
Sbjct 30638 ATTCCCTCTTTATCTTGAATCTTAGCTTTCACATTCTCAATAGTGTCAGAAGGCTCCACT 30579
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| ||| | || || || || | || || ||||| || ||||||
Sbjct 30578 TCAAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAAATCTGCATA 30531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488525832270000
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