Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq2312 105 2e-19
seq2562 100 9e-18
seq1501 100 9e-18
seq2921 98.7 3e-17
seq2707 98.7 3e-17
seq2558 98.7 3e-17
seq2297 98.7 3e-17
seq1613 98.7 3e-17
seq1425 98.7 3e-17
seq1366 98.7 3e-17
seq585 98.7 3e-17
seq1639 96.9 1e-16
>seq2312
Length=608896
Score = 105 bits (116), Expect = 2e-19
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822
|| ||||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 367999 TTCATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGT 367940
Query 2823 TCAACCCCGGGCTTCAGC 2840
|||| |||||| ||| ||
Sbjct 367939 TCAATCCCGGGTTTCGGC 367922
Score = 102 bits (112), Expect = 3e-18
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 365348 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 365407
Query 2825 AACCCCGGGCTTCAGC 2840
|| |||||| ||| ||
Sbjct 365408 AATCCCGGGTTTCGGC 365423
>seq2562
Length=159952
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 113510 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 113569
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 113570 CCCGGGTTTCGGC 113582
>seq1501
Length=1458657
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 491969 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 492028
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 492029 CCCGGGTTTCGGC 492041
>seq2921
Length=121199
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 100873 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 100932
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 100933 CCGGGTTTCGGC 100944
>seq2707
Length=487082
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 234496 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 234437
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 234436 CCGGGTTTCGGC 234425
>seq2558
Length=161101
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 30359 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 30418
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 30419 CCTGGTTTCGGC 30430
>seq2297
Length=240361
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 68508 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 68449
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 68448 CCGGGTTTCGGC 68437
>seq1613
Length=46735
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 7794 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 7853
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 7854 CCGGGTTTCGGC 7865
>seq1425
Length=42402
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 39683 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 39742
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 39743 CCGGGTTTCGGC 39754
>seq1366
Length=45718
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 21051 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 21110
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 21111 CCGGGTTTCGGC 21122
>seq585
Length=99442
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 99318 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 99259
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 99258 CCGGGTTTCGGC 99247
Score = 96.9 bits (106), Expect = 1e-16
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 99148 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 99089
Query 2825 AACCCCGGGCTTCAGC 2840
|| ||||| ||| ||
Sbjct 99088 AATCCCGGATTTCGGC 99073
>seq1639
Length=316308
Score = 96.9 bits (106), Expect = 1e-16
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822
|| || || ||| |||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 316048 TTCATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAGAGGTCCCTGGT 316107
Query 2823 TCAACCCCGGGCTTCAGC 2840
|| | |||||| ||| ||
Sbjct 316108 TCGATCCCGGGTTTCGGC 316125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849084268875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |