Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq2295 127 2e-24
seq806 96.9 3e-15
seq1608 84.2 2e-11
>seq2295
Length=223346
Score = 127 bits (140), Expect = 2e-24
Identities = 202/290 (70%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 99851 ATGTCCGGCCCCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTG 99910
||| |||||||||| ||||| | || | || |||| ||||| | ||||
Sbjct 101873 ATGGCCGGCCCCGTACACCCACGCTTCGCTTCCGAAGCTGCGCGTTTGCGCAGTTTTAAA 101932
Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970
|| ||||||| | || |||||||||||| || | ||||| || ||||| | |||
Sbjct 101933 GACTGGCCGCGATGCATGCGGCAAAAACCAGAGGAACTTGCCGAGGCTGGTTTCTTCTAC 101992
Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030
||||| | || || || || ||||| ||||||| ||||| | ||||||||||||
Sbjct 101993 ACCGGTCAGGGGGATAAGACCAAGTGTTTCTATTGCGATGGCGGTTTGAAAGACTGGGAA 102052
Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGG 100090
| |||| ||| ||| | | ||||| || ||||| ||||||||| | ||||||| |
Sbjct 102053 AATGATGACGTGCCCTGGGAACAGCACGCGCGCTGGTTCGATCGCTGCGCCTACGTGCAG 102112
Query 100091 CTTGTAAAGGGTTACGACTACGTGCAGCGCGTGCTTAGCGAAGCGTGCGT 100140
|| || ||||| ||| ||||| ||| ||| | ||| || |||||
Sbjct 102113 CTGGTGAAGGGCCGCGAGTACGTACAGAAGGTGATGTCCGAGGCCTGCGT 102162
Score = 91.5 bits (100), Expect = 1e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697
|| || ||||||||| | || |||| || ||||| ||||| || || ||||||||||||
Sbjct 101645 AATGGATTTTATTATCTTGGCCGCGGAGATGAAGTACGCTGTGCATTCTGCAAAGTTGAA 101704
Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757
|| ||| | ||| | || ||||| || || || || ||| | || |||||||| |||
Sbjct 101705 ATTATGAGATGGGTCGAAGGCGATGATCCCGCCAAGGACCATCAGCGTTGGGCGCCACAA 101764
Query 99758 TGCCCGTT 99765
||||| ||
Sbjct 101765 TGCCCATT 101772
>seq806
Length=81131
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||||||||| ||||| || ||||| || |||||||| | ||| ||||||
Sbjct 46098 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACCCTCT 46039
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | ||| | || ||| |||||| |||||||| || | || ||||||
Sbjct 46038 GACACAATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCACCAGATCAA 45979
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | |||| || || || || | ||||| ||| | |||||||||
Sbjct 45978 CAAAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACTCTTTCCGATTACAAT 45919
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|| ||||| ||||| ||||| |||||||| | ||||| |||| |||
Sbjct 45918 ATTCAAAAGGAATCAACACTTCATTTAGTTCTAAGGTTGAGAGGTGGA 45871
>seq1608
Length=32450
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| |||||||| ||||| ||||| || || || || ||| | ||| || ||
Sbjct 29391 AATGCAGATTTTTGTGAAAACCTTGACGGGTAAAACTATCACCCTTGAAGTTGAGCCATC 29450
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| || ||| | || ||| |||||| |||||||||||| | ||| |||||
Sbjct 29451 CGACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGCATTCCCCCAGATCA 29510
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| | || || | || || || || |||||||| | || || || |||||
Sbjct 29511 GCAGCGACTGATCTTCGCTGGAAAGCAGTTAGAAGACGGTCGCACACTGTCTGACTACAA 29570
Query 106439 CATACAAAAAGAATCTACACTACA 106462
||| |||||||||||||| || ||
Sbjct 29571 CATCCAAAAAGAATCTACGCTTCA 29594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402315012408800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |