Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1014 120 4e-21 >seq1014 Length=142001 Score = 120 bits (132), Expect = 4e-21 Identities = 185/262 (71%), Gaps = 14/262 (5%) Strand=Plus/Minus Query 333079 TTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCAC 333138 |||||| | ||||||||||| || | |||||| |||| ||||||||||| |||||||| Sbjct 34452 TTTGATCTTGTTGCGCACGACATCGATGCCGCGGTCGTTGGACGCGTTGAGCTCGAGCAC 34393 Query 333139 GGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTT 333198 ||| ||| | ||| || || | || |||||||||||||| |||| | |||||||| Sbjct 34392 GGCGTCGCGGAAGGCGGCGCCGAGCAGCGCGCGCGCCAGGCACAGGATGGTGGTGGTCTT 34333 Query 333199 GCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCC-GTCGGCG----GCC 333253 ||| ||| || |||||||| | | | ||| || ||| || || ||| | Sbjct 34332 GCCGACGCCCGGAGGACCCGCGATTATTATGTTAGGAGCGTTCCCGGTGCGCGCAAACAC 34273 Query 333254 AGC--GCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTG 333311 ||| |||| ||| || | || |||||||| || ||||| || || || | Sbjct 34272 AGCCAGCCTAGAG-------ACCGTGTCTTCGTTGCCCACGATGTCACTGAATACTATCG 34220 Query 333312 GGCGGTACTTTTCGATCCATGG 333333 | ||||| ||||| |||||||| Sbjct 34219 GCCGGTATTTTTCTATCCATGG 34198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177524255781950