Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2898 239 4e-58
seq2205 239 4e-58
seq806 136 3e-27
seq1608 114 1e-20
>seq2898
Length=111689
Score = 239 bits (264), Expect = 4e-58
Identities = 788/1204 (65%), Gaps = 22/1204 (2%)
Strand=Plus/Plus
Query 49338 CCCAGACCTTGATTCATAGCGTTTAACAAGTCGCCGTTGTCGGCGTCAATTTCCCAAGCA 49397
|| ||||| |||||| || |||| | || || ||||| || || |||||||||||
Sbjct 27194 CCAAGACCCATATTCATGGCATTTAGTATATCACCATTGTCTGCATCTATTTCCCAAGCG 27253
Query 49398 AACAGTCCGCCCAGATTCAAATCCAGCACGTATCGACTCTTGTCGACTACCGAGTCGACG 49457
||||| || || || || || | || ||| ||| || | | ||| | |
Sbjct 27254 AACAGACCACCTAGCTTATTATTCCTTACATATTTGGCCTTCTCAATTGTCGATCTGGCA 27313
Query 49458 CTATCGTAACTGATCAAGTCACCGGTGGACGCTTTAAAAACGTACGCCGCTTTAGCGACA 49517
||| || | || | |||||| || | |||| ||||| | |||| ||| ||
Sbjct 27314 TCATCATATGTAATTAGGTCACCAGTTTCCTTCCTAAATACGTAAGGTGCTTGAGCCACT 27373
Query 49518 GTGTCGTATGTGTACTTGTATTGCGCCGGCAACAAACT-GTTTACAATTTGCCTGTAATC 49576
|||| || ||||| | | ||| | ||| | ||| | || | ||||| ||
Sbjct 27374 TTGTCATAATGGTACTCCCACTT-GCCTTGAGCAATTTCGTTGGCTATCTCTCTGTAGTC 27432
Query 49577 CACTACGCCGTCCTCCCAAGTGCCCACGACAGGACCACCGGCAACGCCTGTGAACGGGTT 49636
|||||| || |||| ||| || || ||| || ||| ||| || || ||||| |||||
Sbjct 27433 CACTACACCATCCTGCCAGGTACCTTTGACCGGGCCAGTGGCTACACCAGTGAATGGGTT 27492
Query 49637 GTCATCTGTGTAATCGTCGACTGCGGTCCAACCGCGGCCGTACATTGCCACTCCGATGAC 49696
| ||| ||||| ||| |||| | |||||||| ||||||||||| || || || | |||
Sbjct 27493 TCCGTCTTTGTAACCGTTGACTCCAGTCCAACCACGGCCGTACATAGCTACACCAACGAC 27552
Query 49697 AATTTT-TTCGCTAGCC-ACGTTCTGTTTGAGCAGCTCGCGAACAGCGGTGTCAGTGGTG 49754
|||||| || | || || ||| | ||| ||| || |||||| |||
Sbjct 27553 AATTTTCTTAGG--GCTGACTCCCTGAGCCAACAGGAATTTGACACCGAAGTCAGTTGTG 27610
Query 49755 TACAGT-TCGCCGGCGTTCCACAGCGGCGCATACAAATTGGTTTGGTAACCTAAATCGAC 49813
|| ||| || || |||||| || || | || | ||||| || | | | |
Sbjct 27611 TA-AGTCTCCTTGGGGTTCCAGGCGGGAGCGTGCAGGGCAGCTTGGTGGCCAAGAGTGTC 27669
Query 49814 ATTGGACCAAGCACCTTTAAAATCGTACGACATTAGAAAAATTTGATCTAAATATTGCTG 49873
|| |||||||| || || || ||||| ||| | || || || || | || |||||
Sbjct 27670 GTTTGACCAAGCTCCCTTGAAGTCGTAGCTCATCAAGAAGATGTGGTCCATGTACTGCTG 27729
Query 49874 GGC-GCTAGCATAGTCGACCAACTCGATTTTGTCATAGCCGGCGCCAATAGCTGAAGTCA 49932
|| ||| ||||| || | || || ||||| | || | || || ||||||||||
Sbjct 27730 AGCCGCTTTG-TAGTCTACTACCTGAATCTTGTCCCAACCAGAGCTGATGGCTGAAGTCA 27788
Query 49933 AAAGCAGTTTACGACCGGTCTGCTCTTGCACTTCGTCTAACATTTTGCGCAACTCTTTAA 49992
||| || |||| | || |||| | ||| | | || || || |
Sbjct 27789 GTTCGTATTTCTTTCCAGTCTTGGCAGACAGCTCGTTAAGCATCTCTCTCAGTTCCTTCA 27848
Query 49993 GCAAAATCACGTACGTGGCACCGTCATTGTCAACATCTCCCAAAATC-GGGTTGGCGCCT 50051
|| ||||| || |||||||| | || || | ||| ||||| |||||
Sbjct 27849 TCAGCTCGACGTAGATGTGACCGTCATC----AGGGCTACCGAGATCAGGGTTAGCGCCC 27904
Query 50052 TTGCCGCCCGGAAACTCCCAGTCAATGTCGACGCCGTCGAAAAATTTCCAAACTTGTAAA 50111
|| || || || ||||||||||||||||| || || || || |||||||| || |
Sbjct 27905 TTACCACCAGGGAACTCCCAGTCAATGTCCACTCCATCAAAGAATTTCCAGGTTTCAAGG 27964
Query 50112 AATTCGCGAACCGACTCCACAAA-CACTTT-TCTGATCGC-GTCATCGTGCATGAAAAAG 50168
|| || || || || || || | ||| ||| | | |||| ||| | ||| |||
Sbjct 27965 AAGTCCTTCACAGAGTCAACGAAGCGCTTCCTCTTAACCTTGTCA--GTGAA-GAAGAAG 28021
Query 50169 AATGGATCCGACAGAGTCCAACCGCCGATCGAAGGCAAAATTTTAATGTGCGGATGCGCC 50228
|||||||| | ||| |||||||| || | ||||| || || || | || || |||
Sbjct 28022 AATGGATCAGCCAGGGTCCAACCACCAACGGAAGGTAAGATCTTCAGGTCAGGTCTTGCC 28081
Query 50229 TTTTTGACGGCCATTAACTGACCAAAATTGCCTTTATACGGTTCGTTCCACGCGGACACT 50288
| ||| | ||| | ||| || ||||| || || || ||||||||||| | | ||
Sbjct 28082 TGTTTCAACATCATCAGCTGTCCGAAATTACCCTTGTAGGGTTCGTTCCAGGACGCCAGA 28141
Query 50289 CCTTTTTGCGGCTTCTGTATGGCGGCCCAAGGGTCGTGTATGGACACTTTAAAATCTTCC 50348
|| ||||| || ||||| | || |||||||||||||| || || ||||| || || |||
Sbjct 28142 CCCTTTTGTGGTTTCTGAAGAGCTGCCCAAGGGTCGTGAATCGATACTTTGAAGTCCTCC 28201
Query 50349 CGTCCCGCACACGATCGCTGCAACGCCTCGAAACTGCCGGTGATGGTTTTGAGGCTGTCG 50408
| || || ||||| |||| || | ||| ||||| ||| ||| | ||||||
Sbjct 28202 CTGCCACTGCAGGATCGTTGCAGAGCTTGGAAGCTGCCTTCGATTTCTTTCAAACTGTCG 28261
Query 50409 TTGATACCGTCGCCGCCGCAAATGGGAATGAAACCGTACAACAGATGAGTTAAATTTGGC 50468
||||| || || || ||||| || || ||||||||||||| ||||| || | ||| ||
Sbjct 28262 TTGATGCCATCTCCACCGCAGATTGGGATGAAACCGTACAGAAGATGGGTAAGATTCGGG 28321
Query 50469 ACAGGCACTTTGTCCGCTGGAAAGTTGCGACCGTATACTCCCCACTCAACAAAGTATGCC 50528
| || || ||| | || || || | ||| || ||||| || || ||||| | |
Sbjct 28322 ATGGGTACGCGGTCGACGGGGAACTTCCTGGGGTAGACGCCCCATTCGACGAAGTAAG-C 28380
Query 50529 GCCA 50532
||||
Sbjct 28381 GCCA 28384
>seq2205
Length=656796
Score = 239 bits (264), Expect = 4e-58
Identities = 1090/1702 (64%), Gaps = 45/1702 (3%)
Strand=Plus/Plus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || ||||| || || ||||| | ||| ||||| ||||| ||||| ||||| ||
Sbjct 19191 TTGTCAACAGTGAACTGGATAGCATTTGCGGCTGGCTTCGTGCGTAAATAGTACATTCCC 19250
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGAT-GCTGCACATTGTTTGGTAATTGGG 130524
||||| | || ||||| |||| || || | || ||| | ||||| ||
Sbjct 19251 GTTTTTAAGCCCATTTTCCACGCATAGAAATGAATAGATGTCAATT-TACCATAATTTGG 19309
Query 130525 TTGCGCCAC--GAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCA 130582
|| || || |||||| ||| ||||| ||||||||||| || || ||||| |||
Sbjct 19310 TTCAGCAACATGAATAT--TGAAGGATTGGCTCTGATCAATAAATGCCCCTCTGTCAGCA 19367
Query 130583 GCCATGTCGAGCATGGTTTTATTTTT---CATCTCCCAAGCGGTCTTGTATAGATCCCTA 130639
||||| | | || ||| | ||| || ||||| | || || |||| |||||
Sbjct 19368 GCCATTT---GTATTGTTGTTTTTACAGACACTTCCCAGACAGTTTTATATAAGTCCCTT 19424
Query 130640 ATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTG 130699
|| | ||| || || |||| ||||| || || ||| || || ||
Sbjct 19425 ATATCTTTAGGAATTGCTTCAATATTTTGAATAGATCCATTATTGTGGATGATAAGATTT 19484
Query 130700 CGCATACTTTTATCGTACAATCCAAGCTGTACA-AGATCTTTTACCAAATGATTATTAAT 130758
|||| || ||| | || || ||| | | |||| || |||||||| |||||
Sbjct 19485 TTCATATCTTCATCCCATAAATCA-GCTTCAGTTAAATCTCGTAACAAATGATGATTAAC 19543
Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818
| ||| || ||||| | || ||| ||||| ||||||||| || || ||||||||
Sbjct 19544 AACTTGGAATTCACCTGACAAGACTCGTCTTTGATAAATGTTGGAAGTAAATGGTTCAAA 19603
Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878
||||| || || || |||||||| || || | ||| || ||||| || | ||||||
Sbjct 19604 TGATTCATTATTTCCCAATATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTAATAATAG 19663
Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938
||||| | |||||| || | | |||||| || | | |||||| ||| |
Sbjct 19664 GGAATTTCTAAGACCATGTTTGGCTATTTTTTCTTTGAGTGACACCCAATTCCACAAGTC 19723
Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998
|| || | || |||||||||||| |||| | ||| |||| |||||| |||| |
Sbjct 19724 TGTGGGGGTT---TTATTCCACATATCATATTGCAATATACCTTGACTGGCAGGACAGCC 19780
Query 130999 TTCGAACGATTCGTAGATTCC-TTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTC 131057
||| | | || |||| || | | | | ||| | || || ||||| | || |
Sbjct 19781 TTCATAAGTCTCATAGACGCCATACTTCTC-AGCTAACTCACAACTGGCTTCTAGTGCCC 19839
Query 131058 CGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAG 131117
| |||||||| ||||| ||||||| |||||||| | ||| | || |||||||
Sbjct 19840 CATAATAAATTGTTTCAAATATTTGTTGATTTAATTTAATTGCTGCCTCACTTTCGTAAG 19899
Query 131118 GAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTAT 131177
| | |||||||| ||| || || || | || || | |||| || | |||| |
Sbjct 19900 GTATACGCATTAAAACAAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGT 19959
Query 131178 GTTTTAAATT--ACATTTACGCGAACATTCGGTGGGATAAAGGTTAATGTCAATTATTTT 131235
| | | ||| | ||| || | | |||| ||| || | ||||| |||||
Sbjct 19960 GCCTCATATTTGAGTTTTTTGC-CTCTGGCACTGGG-TAATAATTTACATCAATAATTTT 20017
Query 131236 GTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCC 131295
|||| ||| | || | | | || || || |||||| ||||| | | ||
Sbjct 20018 ATTTAGATTCTGAGTTATAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGT--- 20074
Query 131296 AGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTC 131355
| || || ||||| ||||| | ||||| || ||||| || || ||| |||
Sbjct 20075 TTTGTCCTCATTCACAAACATATTTAAAGCAATTGATGCTAGATTGCACACAGCCACTTC 20134
Query 131356 GTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415
|| | | || | |||||||| | |||||| || |||| || || || |||||
Sbjct 20135 ATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAA 20194
Query 131416 ATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCG 131474
|| | ||| |||||||| ||| |||| || || || | |||||| || || || |
Sbjct 20195 GTTCTTTTGGTTGCTTTTTCTATT-GCATGAATCTTTATAAAGCATGTATGGAGTTCCTG 20253
Query 131475 TTTCGACTTGAGTTTCAATAAT--GTATCGAAAGAGTTTTCGAGCAGACAATTGATATTT 131532
|||| ||||| | ||| ||||| | || ||||| || |||| || ||| |
Sbjct 20254 TTTCAACTTGTGCTTCGATAATAGCTTTCCAAAGAACTT--GAGCTCTCACTTGTTTCAC 20311
Query 131533 GTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACT 131592
| | | || |||||| || || || ||||| | |||||| || || | |||
Sbjct 20312 GAAGCGACCCTCTTTTTCATATTTCTCATACAAAGCTTCAAA---TTCCTCACCCCAACA 20368
Query 131593 GTC--CAAAT-TGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAAC 131649
||| | | | |||||||| ||| ||||| | ||| | || ||| ||
Sbjct 20369 GTCTGCTAGTCCAGGACATTCATGGGGGCACATGATACTCCAATCTTGATTGCTTTCTAC 20428
Query 131650 TCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTC 131709
|| ||||| ||||| || || | |||||| || || || || ||||| || ||
Sbjct 20429 TCTTTTCATGAACAAGTCAGGTATCCATAAAGCATAGAATAGCTCTCTGGCACGGACTTC 20488
Query 131710 TTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTC 131769
|||| | || | | |||||||||| | || || || || || |||||||| |||||
Sbjct 20489 TTCTTTCCCAGTGTTCTTTTTCAAATCAAGGAATTCAAATATATCAGCATGCCATGGTTC 20548
Query 131770 CAAATACACTGCCATTGCGCC---TTTGCGCTTACCGCCTTGATTAACATGACGAACCAT 131826
|| || | || | |||||| | | ||||| ||||| | |||| ||| | |
Sbjct 20549 TAAGTATATGGCAAATGCGCCGGGTCTTTTATTACCTCCTTGGTCTACATATCGAGCAGT 20608
Query 131827 GTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAAT 131886
||||||||| || | |||||||| | | ||| || | | ||||| || | ||
Sbjct 20609 GTTGTTGTAAACTCTTAACATGGGTACTAGACCATTAGAGACACCATTTGTACCAGCTAT 20668
Query 131887 GTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGA 131946
|| | || || ||||| || ||| || | || || || || || | | |||||
Sbjct 20669 ATAAGTTCCCTTTGCTCTAATGCAGTGTACATGAAGACCTATCCCACCAGCTGACTTAGA 20728
Query 131947 GATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTC 132006
|| || || |||| ||| |||| ||| || || || | ||| || | || |
Sbjct 20729 AATGAGGGCACATTGTTTTAACGTGTCATAAATTCCCTCAATGCTATCATCCCTCATTGC 20788
Query 132007 GACTAAAAAGCAAGAGGACAACTGT--TGGTGAAATGTGCCGGCTGAAAACAATGTGGGG 132064
| | |||||| || || || ||| | ||| | || | ||||| || | || ||
Sbjct 20789 TATAAGAAAGCATGAAGATAATTGTGGTCGTGGA--GTTGCTGCTGAGAAAAGAGTTGGA 20846
Query 132065 CTGGCGTGTGTAAAAAGTTTTT 132086
|| || ||||||||| |||||
Sbjct 20847 CTTGCATGTGTAAAATATTTTT 20868
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097
|||||| || || || || || || ||||| ||||||| | | |||| | |||||
Sbjct 562495 TACCAAGTGGAATGTGGATTCCTTCTGAATGTTGTAGTTTGTGAGAGTGCGGCCATCTTC 562436
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
| ||||||||||||| | || ||||| || || || ||||| | | |||||| ||
Sbjct 562435 CAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGGATGCTCTCTTTGTCCTG 562376
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
||||| |||| | || | |||||||| || || ||||| || | |||| ||
Sbjct 562375 AATCTTTGCCTTCACATTCTCAATAGTGTCTGAAGCCTCCACTTCGAGGGCGATAGTCTT 562316
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||||||| ||||| || |||||||||||
Sbjct 562315 ACCCGTCAGGGTTTTTACGAAGATTTGCAT 562286
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077
|| ||||| | || || | ||||| || | || || || ||||| || || |||||
Sbjct 546108 TTACCTCCTCTCAGCCTGAGCACCAAGTGAAGAGTGGATTCCTTTTGGATGTTATAGTCT 546167
Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137
| |||| | ||||| | ||||||||||||| | || ||||| || || || |||
Sbjct 546168 GAAAGAGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGC 546227
Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197
|| | |||||||| || ||| || || | | || | |||||||| || ||
Sbjct 546228 GGAATGCCCTCTTTGTCCTGGATTTTTGCCTTTACATTCTCAATAGTGTCTGAAGCCTCC 546287
Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || || | || |||||||| ||||| || ||||| |||||
Sbjct 546288 ACCTCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATCTGCAT 546337
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077
|| ||||| | || || | || || || | || || || || || || ||||||||
Sbjct 548978 TTACCTCCTCTCAGCCTAAGCACTAAGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCT 548919
Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137
| |||| | ||||| | ||||||||||||| | || ||||| || || || |||
Sbjct 548918 GAGAGTGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGC 548859
Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197
|| | |||||||| || ||||| |||| | || | |||||| | || ||
Sbjct 548858 GGGATGCCCTCTTTGTCCTGAATCTTTGCCTTCACATTCTCAATAGTGTCCGAAGCCTCC 548799
Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || || | || |||||||| ||||| || |||||||||||
Sbjct 548798 ACCTCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATTTGCAT 548749
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || || || || || || ||||| ||||||| | |||| |||||
Sbjct 554338 ACCAAGTGGAATGTGGATTCCTTCTGAATGTTGTAGTTTGAGAGTGTGCGGCTATCTTCC 554279
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| ||||||||||||| | || ||||| || || || ||||| | |||||| ||
Sbjct 554278 AACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGGATGTTCTCTTTGTCCTGA 554219
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| || |||| | || | |||||||| || || || || || || || | ||
Sbjct 554218 ATATTTGCCTTCACATTCTCAATAGTGTCTGAAGCCTCCACCTCGAGGGTAATGGTATTA 554159
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||||||| ||||| || |||||||||||
Sbjct 554158 CCCGTCAGGGTTTTTACGAAGATTTGCAT 554130
>seq806
Length=81131
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
||||||||||| |||||||| || || | ||||| |||||||| ||||||||||| | |
Sbjct 48410 CCTCCGCGCAAACGCAATACTAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCTGAT 48469
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||| |||| | ||||| | |||||| ||||| | || | || || ||||| || ||
Sbjct 48470 AATG-TGCGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAATCGTTGCTGATCAGGTGG 48528
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||| ||||| ||| ||| ||| | |||| | ||||| | | |||||
Sbjct 48529 GATACCCTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATTGTGTCAGAAGGCTCAAC 48588
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| ||| || | |||||| |||| ||||| || || |||||||||
Sbjct 48589 CTCTAAAGTGATGGTTTTGCCAGTCAATGTTTTTACGAAAATTTGCATA 48637
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||||| | || ||||| | || || || |||||||||||||| |||
Sbjct 45872 CCACCTCTCAACCTTAGAACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGAA 45931
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| ||||||| ||||| ||||| ||| |||| | | |||||||| || ||
Sbjct 45932 AGAGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 45991
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||||| || || ||| ||| | |||| | ||||| | || |||||||
Sbjct 45992 ATTCCCTCTTTGTCTTGAATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACT 46051
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| || || | ||| || || | |||||||||||| ||||||||
Sbjct 46052 TCTAATGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 46098
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097
|||||| || | || || || || ||||||||||| || || | | ||| | || ||
Sbjct 47971 TACCAAGTGAAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAGGTTCGCCCATCCTC 48030
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
| || || |||||| | || | |||||||| || || || | ||| || || ||
Sbjct 48031 CAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATACCTTCCTTGTCCTG 48090
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|| || ||| | |||| | ||||| | || |||||||||||| || |||| ||
Sbjct 48091 AATTTTAGCTTTGACATTTTCAATTGTGTCAGAGGGTTCAACTTCTAGTGTGATAGTCTT 48150
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| |||| |||||| || ||||||||||||
Sbjct 48151 GCCAGTCAAAGTTTTGACGAAGATTTGCATA 48181
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| || | ||| | ||||| || || || |||||||||||| | |||| |
Sbjct 48650 CGCAGCACGAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGTCCA 48709
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | ||||| |||||| | || | | ||||||||| || || | || || |||
Sbjct 48710 TCTTCCAATTGTTTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGGAATGCCTTCCTTA 48769
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| || || ||| | | |||| | || || | || ||| || |||| |||||
Sbjct 48770 TCTTGAATTTTTGCTTTAACGTTTTCAATGGTATCAGAGGGTTCCACCTCTAATGTTATG 48829
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| ||||||| ||| ||||||||||| |||||
Sbjct 48830 GTTTTCCCCGTCAAAGTCTTCACAAAGATCTGCAT 48864
>seq1608
Length=32450
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| ||||| |||||||| | || || ||||| ||||| ||||||||
Sbjct 30302 CCACCACGCAGACGCAAAACCAAATGCAGAGTCGACTCTTTCTGAATGTTGTAGTCAGAA 30243
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | ||||| |||||||| |||||| | || |||||||| || || || ||
Sbjct 30242 AGAGTGCGTCCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGA 30183
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || || || || ||||||| || | |||| | || || | | |||||||
Sbjct 30182 ATTCCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCGATGGTATCAGAAGGTTCAACT 30123
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| || || | ||| || || || || ||||| || |||||||||
Sbjct 30122 TCTAGGGTGATGGTTTTTCCAGTGAGGGTCTTCACGAAAATTTGCATA 30075
Score = 113 bits (124), Expect = 4e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109
|||||| |||||||| || |||||||| || |||| ||||||| | ||| || ||
Sbjct 29589 CGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTGCGACCGTCTTCTAACTGCTTTCC 29530
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
||| | || || ||||| ||||| || || | || ||||| || || ||| |||
Sbjct 29529 AGCGAAGATCAGTCGCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGAATTTTGGCTTT 29470
Query 27170 CAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAG 27228
| |||| | |||||| | ||||| ||||||| || || |||| ||| ||||||| |
Sbjct 29469 TACATTTTCAATAGTGTCGGATGGCT-CAACTTCAAGGGTGATAGTTTTACCCGTCAAGG 29411
Query 27229 TTTTCACAAAGATTTGCAT 27247
|||||||||| || |||||
Sbjct 29410 TTTTCACAAAAATCTGCAT 29392
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| ||||| ||||| || | ||||| || || ||||| || ||||||
Sbjct 30986 CCACCACGCAGACGCAAAACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAA 30927
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | ||| | ||||| ||||| ||||| ||| | || |||||||| || || || ||
Sbjct 30926 AGGGTACGCCCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGA 30867
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || || || || ||||||| || | |||| | || || | | |||||||
Sbjct 30866 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTTTCAATGGTATCAGATGGTTCAACT 30807
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| || || | ||| || || || || ||||| || |||||||||
Sbjct 30806 TCTAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCATA 30759
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| |||| ||||| || | ||||| ||||| || || ||||| ||
Sbjct 30758 CCACCTCGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAA 30699
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | ||| | ||||| ||||| || || || | || |||||||| || || || ||
Sbjct 30698 AGGGTACGCCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 30639
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||||||||| ||||| ||||| | || | |||||| | | || |||
Sbjct 30638 ATTCCCTCTTTATCTTGAATCTTAGCTTTCACATTCTCAATAGTGTCAGAAGGCTCCACT 30579
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | ||| || || || || ||||| || || ||||||
Sbjct 30578 TCAAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAAATCTGCATA 30531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424918992808200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |