Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1608 185 1e-41 seq806 161 1e-34 seq2205 154 2e-32 seq1404 91.5 2e-13 >seq1608 Length=32450 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || || || || || | || ||||| || | Sbjct 30760 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACCATCACCTTAGAAGTTGAACCATCT 30819 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||| || || ||||||||||| |||||||| ||||||||| Sbjct 30820 GATACCATTGAAAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 30879 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| || || |||| |||||||| | |||||||| Sbjct 30880 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGGCGTACCCTTTCCGACTATAAC 30939 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| | || |||||||| || ||||| Sbjct 30940 ATTCAGAAGGAATCTACCCTTCACTTGGTTTTGCGTCTGCGTGGTGG 30986 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || || || || |||||||| |||||| | | Sbjct 29848 ATGCAGATTTTCGTGAAGACATTGACTGGAAAAACCATCACTCTTGAAGTTGAGCCTTCT 29907 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || || ||||| |||||||||||||| ||||||||| Sbjct 29908 GACACTATTGAGAATGTAAAGGCCAAGATCCAGGATAAGGAGGGAATTCCCCCAGACCAG 29967 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||||||||| || || || ||||| || || |||| |||||||| | |||||||| Sbjct 29968 CAGCGTCTAATCTTCGCCGGCAAGCAGCTTGAAGATGGGCGTACCCTTTCCGACTATAAC 30027 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| | ||||||||||| || ||||| Sbjct 30028 ATTCAGAAGGAATCTACCCTTCACTTGGTCTTGCGTCTGCGAGGTGG 30074 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || || ||||| || ||||| || ||| | Sbjct 30304 ATGCAGATTTTCGTAAAGACATTGACTGGAAAAACTATCACCCTTGAAGTGGAGCCTTCC 30363 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||||||||||| || |||||||| |||||||| || |||||| Sbjct 30364 GATACCATTGAAAACGTAAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 30423 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| || || |||| || || || | |||||||| Sbjct 30424 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACTCTTTCCGACTATAAC 30483 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| | ||||||||||| || ||||| Sbjct 30484 ATTCAGAAGGAATCTACCCTTCACTTGGTCTTGCGTCTGCGAGGTGG 30530 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || || || || || |||||||| || ||| | | Sbjct 30532 ATGCAGATTTTCGTGAAGACCCTCACTGGTAAAACCATCACTCTTGAAGTGGAGCCTTCT 30591 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| |||| ||||| ||||| || || ||||||||||| ||||||||| Sbjct 30592 GACACTATTGAGAATGTGAAAGCTAAGATTCAAGATAAAGAGGGAATTCCCCCAGACCAG 30651 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| || || |||| |||||||| | || || || Sbjct 30652 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGGCGTACCCTTTCTGATTACAAC 30711 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| || ||||| | ||| ||||||| || ||||| Sbjct 30712 ATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGCGAGGTGG 30758 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || || ||||| |||||||| || ||| | | Sbjct 30988 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACTATCACTCTTGAAGTGGAGCCTTCT 31047 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || || |||||||||||||||||||| ||||||||| Sbjct 31048 GACACTATTGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 31107 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || |||| ||| || || | ||||| || Sbjct 31108 CAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGACTACAAC 31167 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||| | ||| | || |||||||| || ||||| Sbjct 31168 ATTCAGAAAGAGTCTACTTTGCATTTGGTTTTGCGTCTGCGAGGTGG 31214 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || |||||||| || ||||| ||||| || || || ||| | Sbjct 29620 ATGCAGATTTTCGTTAAAACGCTTACTGGTAAGACAATTACCCTCGAAGTCGAGCCTTCA 29679 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| |||||||| ||||| || || || || ||||||||| Sbjct 29680 GATACTATCGAGAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCACCAGACCAG 29739 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 29740 CAAAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 29799 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||||||| ||||| || ||| ||||||| || ||||| Sbjct 29800 ATTCAAAAGGAATCCACCCTTCACCTGGTCCTGCGTCTGCGAGGTGG 29846 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || || ||||| || || || || ||| | | Sbjct 31216 ATGCAGATTTTCGTGAAGACCTTGACTGGAAAAACTATCACCCTCGAAGTCGAGCCTTCT 31275 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| | ||||| || || || |||||||| |||||||| ||||||||| Sbjct 31276 GATACCATCGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 31335 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| || || || || |||| |||||||| | ||||| || Sbjct 31336 CAGCGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGGCGTACCCTTTCTGACTACAAC 31395 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||||| ||| | || |||||||| || ||||| Sbjct 31396 ATTCAGAAAGAGTCGACTCTGCATTTGGTTTTGCGTCTGCGAGGTGG 31442 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || || ||||| || || || || ||| || | Sbjct 31444 ATGCAGATTTTCGTGAAGACCTTGACTGGAAAAACTATCACCCTCGAAGTCGAGCCATCT 31503 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||||||||||| || |||||||| |||||||| ||||||||| Sbjct 31504 GATACCATCGAAAACGTTAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 31563 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || || |||| || || || | ||||| || Sbjct 31564 CAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACTCTTTCTGACTACAAC 31623 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || ||||| || | || | ||||| || ||||| Sbjct 31624 ATCCAGAAAGAGTCTACTCTGCACTTGGTACTCCGTCTGCGTGGTGG 31670 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || || || || || || || ||||| | | Sbjct 30076 ATGCAAATTTTCGTGAAGACCCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCTTCT 30135 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| | ||||| || || || |||||||| |||||||| ||||||||| Sbjct 30136 GATACCATCGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 30195 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || || || || || |||| || || || | ||||| || Sbjct 30196 CAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGACGCACTCTTTCTGACTACAAC 30255 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||||| ||| | || |||||||| || ||||| Sbjct 30256 ATTCAGAAAGAGTCGACTCTGCATTTGGTTTTGCGTCTGCGTGGTGG 30302 >seq806 Length=81131 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || | || ||||||||||| || || || ||||| | | Sbjct 48180 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACTATCACACTAGAAGTTGAACCCTCT 48121 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || |||||||||||||||||||| || ||||| |||||||| Sbjct 48120 GACACAATTGAAAATGTCAAAGCTAAAATTCAGGACAAGGAAGGTATTCCCCCAGACCAA 48061 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || |||||| | ||||||| || ||| | | || || ||| Sbjct 48060 CAGCGATTGATCTTCGCCGGCAAGCAATTGGAGGATGGGCGAACCTTGTCTGATTACAAT 48001 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||||||||||||||| | || | ||||| || ||||| Sbjct 48000 ATTCAGAAGGAATCCACTCTTCACTTGGTACTTCGTCTACGTGGTGG 47954 Score = 138 bits (152), Expect = 1e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27434 GCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAA 27493 |||||||||| || || || |||||| || ||| | |||| |||| | |||||||||| Sbjct 46298 GCAAGACTATCACACTAGAAGTTGAGCCATCTGACACAATTGAAAATGTCAAGGCTAAAA 46239 Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||||||||||| || |||||||||||||| ||| | | || || || || |||||| Sbjct 46238 TTCAGGACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATCTTCGCCGGCAAGCAAT 46179 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 | ||||||| || || | | || || ||| | || |||||||| || | ||| ||| Sbjct 46178 TGGAGGATGGACGAACATTGTCTGATTACAATATTCAGAAGGAATCTACGTTGCATTTAG 46119 Query 27614 TCTTGCGTCTTCGCGGTGG 27632 || | |||||| | || || Sbjct 46118 TCCTCCGTCTTAGAGGCGG 46100 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || | || || || || || ||| | || |||||| | Sbjct 48409 AATGCAAATATTCGTAAAAACTTTAACTGGTAAAACAATAACTTTAGAAGTTGAGCCGTC 48350 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| |||| | || || ||||| ||||| ||||| || ||||| |||||||| Sbjct 48349 TGACACAATTGAAAATGTCAAAGCCAAAATACAGGATAAGGAAGGTATTCCCCCAGACCA 48290 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || || || || || || | ||||||| || || || | || ||||| Sbjct 48289 GCAGCGACTGATCTTCGCAGGCAAACAGTTAGAGGATGGCCGCACTCTTTCTGATTATAA 48230 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || ||||| || | || | ||||| || ||||| Sbjct 48229 TATCCAGAAGGAGTCAACTCTCCACTTGGTACTTCGTCTGCGTGGTGG 48182 Score = 125 bits (138), Expect = 8e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || || ||||| | || ||||| | | Sbjct 46098 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACCCTCT 46039 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || |||||||| ||||| ||||||||||| ||||| || Sbjct 46038 GACACAATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCACCAGATCAA 45979 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| ||||||||||| || || || | || || || | || || ||| Sbjct 45978 CAAAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACTCTTTCCGATTACAAT 45919 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | ||||||||||| || |||||| |||| Sbjct 45918 ATTCAAAAGGAATCAACACTTCATTTAGT 45890 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || || || || || | ||||| || | | Sbjct 48864 ATGCAGATCTTTGTGAAGACTTTGACGGGGAAAACCATAACATTAGAGGTGGAACCCTCT 48805 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || || |||||||| || ||||| || |||||||| || || Sbjct 48804 GATACCATTGAAAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCTCCCGATCAA 48745 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || || || || ||| | || |||| || || || | ||||| ||| Sbjct 48744 CAGAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGCACTCTTTCCGACTACAAT 48685 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||||||||| || ||||||| | ||||| Sbjct 48684 ATCCAGAAGGAGTCTACTCTTCATCTCGTGCTGCGTCTCAGAGGTGG 48638 >seq2205 Length=656796 Score = 154 bits (170), Expect = 2e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| |||||| ||||| || || || || || || ||||| || || || ||||| ||| Sbjct 546342 CTACAATGCAGATCTTCGTAAAAACCCTGACGGGTAAGACCATCACCCTCGAGGTGGAGG 546283 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | |||| ||| | ||||| ||||| |||||||| ||||| ||||| |||| Sbjct 546282 CTTCAGACACTATTGAGAATGTAAAGGCAAAAATCCAGGACAAAGAGGGCATTCCGCCAG 546223 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||| ||||| || || || ||||| || | || |||| || || || |||||| Sbjct 546222 ACCAGCAACGTCTTATCTTCGCCGGTAAACAGTTGGAAGATGGCCGCACTCTTTCAGACT 546163 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCA 27608 |||| |||||||||||||||||||||| Sbjct 546162 ATAACATCCAAAAGGAATCCACTCTTCA 546135 Score = 143 bits (158), Expect = 3e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| |||||||||||| || || || || || || ||||| || || || ||||| ||| Sbjct 548744 CTACAATGCAAATCTTCGTAAAAACCCTGACGGGTAAGACCATCACCCTCGAGGTGGAGG 548803 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | |||| ||| ||||||| || ||||||||||| ||||| || || |||| Sbjct 548804 CTTCGGACACTATTGAGAATGTGAAGGCAAAGATTCAGGACAAAGAGGGCATCCCGCCAG 548863 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||| ||||| || || || ||||| || | || |||| || || || |||||| Sbjct 548864 ACCAGCAACGTCTTATCTTCGCCGGTAAACAGTTGGAAGATGGCCGCACACTCTCAGACT 548923 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || |||| ||||||||||| || || |||| Sbjct 548924 ACAACATCCAGAAGGAATCCACACTCCACTTAGT 548957 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||||||||| || || || || || || |||||||| | || || || ||| | Sbjct 562282 TACAATGCAAATCTTCGTAAAAACCCTGACGGGTAAGACTATCGCCCTCGAAGTGGAGGC 562341 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 || | |||| ||| ||||||| || ||||||||||| ||| | || || ||||| Sbjct 562342 TTCAGACACTATTGAGAATGTGAAGGCAAAGATTCAGGACAAAGAGAGCATCCCGCCAGA 562401 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 |||||| ||||| || || || ||||| || | || |||| || || || || |||| Sbjct 562402 CCAGCAACGTCTTATCTTCGCCGGTAAACAGTTGGAAGATGGCCGCACTCTCACAAACTA 562461 Query 27582 TAATGTCCAAAAGGAATCCAC 27602 || | || ||||||||||| Sbjct 562462 CAACATTCAGAAGGAATCCAC 562482 Score = 116 bits (128), Expect = 4e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| |||||||||||| || || || || || || || || ||||| || ||||| ||| Sbjct 554125 CTACAATGCAAATCTTCGTAAAAACCCTGACGGGTAATACCATTACCCTCGAGGTGGAGG 554184 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | |||| ||| ||||||| || ||||||||||| ||| || || |||| Sbjct 554185 CTTCAGACACTATTGAGAATGTGAAGGCAAATATTCAGGACAAAGAGAACATCCCGCCAG 554244 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||| ||||| || || || ||||| || | || ||| || || || || ||| Sbjct 554245 ACCAGCAACGTCTTATCTTCGCCGGTAAACAGTTGGAAGATAGCCGCACACTCTCAAACT 554304 Query 27581 ATAATGTCCAAAAGGAATCCAC 27602 | || | || ||||||||||| Sbjct 554305 ACAACATTCAGAAGGAATCCAC 554326 >seq1404 Length=44454 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || || ||||| || ||||||||||| ||| | Sbjct 41977 ATGCAGATTTTCGTCAAAACCCTAACGGGTAAGACCATCACTCTTGAGGTCGAGCCCTCC 42036 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| |||| || || || ||||| ||||||||||| || || |||||| Sbjct 42037 GATACTATCGAAAATGTGAAAGCCAAGATCCAGGATAAGGAGGGAATCCCCCCTGACCAG 42096 Query 27526 CAG 27528 ||| Sbjct 42097 CAG 42099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570289191582000