Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2898 183 3e-41 seq1608 149 5e-31 seq806 147 2e-30 seq2205 118 9e-22 seq2446 86.0 5e-12 >seq2898 Length=111689 Score = 183 bits (202), Expect = 3e-41 Identities = 639/994 (64%), Gaps = 5/994 (1%) Strand=Plus/Plus Query 53570 CAATTTTTTCGTCAATTTTTCGGTAATCAACGACTCCGTCTTCCCATGTGCCTGTAACAG 53629 |||||| | | | || | || ||| || || || || || | ||| || ||| | || | Sbjct 27405 CAATTTCGTTGGCTATCTCTCTGTAGTCCACTACACCATCCTGCCAGGTACCTTTGACCG 27464 Query 53630 GGCCAGTTGCCACACCGGTGAACGGATTGTCATCGCGGTAGCCGCTCACTCCAGTCCAAC 53689 ||||||| || ||||| ||||| || || | || ||| ||| | ||||||||||||| Sbjct 27465 GGCCAGTGGCTACACCAGTGAATGGGTTTCCGTCTTTGTAACCGTTGACTCCAGTCCAAC 27524 Query 53690 CGCGCCCGTACATCGCCACTCCGAGAACAATTTT-TTCCTGTTGAACTTTTTGTTCGAGC 53748 | || |||||||| || || || | |||||||| || | ||| || || | | | Sbjct 27525 CACGGCCGTACATAGCTACACCAACGACAATTTTCTTAGGGCTGA-CTCCCTGAGCCAAC 27583 Query 53749 AACGCGCGCACGGCAACATCGGCCGTGTAATGCTCGCTGGGAGACCAAACCGGCGCGTAA 53808 | || | | || | |||||| ||| |||| ||| | || |||| Sbjct 27584 AGGAATTTGACACCGAAGTCAGTTGTGTAAGTCTCCTTGGGGTTCCAGGCGGGAGCGTGC 27643 Query 53809 ATCGCCGTTTGATGTCCCAAATCGGTGTTTGACCAAGCGCCTTTAAAATCATACGACATT 53868 | || | ||| || || | | | |||||||||||| || || || || || ||| Sbjct 27644 AGGGCAGCTTGGTGGCCAAGAGTGTCGTTTGACCAAGCTCCCTTGAAGTCGTAGCTCATC 27703 Query 53869 aaaaaaaTTCTGTCCAGGTATTGTTGGGCGTCGCGATAGTTGACGACCGCAATTTTATCA 53928 || || || ||||| ||| || || || | |||| || ||| ||| || || Sbjct 27704 AAGAAGATGTGGTCCATGTACTGCTGAGCCGCTTTGTAGTCTACTACCTGAATCTTGTCC 27763 Query 53929 TTGCCTGCACTGATTGCGCTAGTCAACTCGAACTTTCGTCCAGTTTCCAATTCCAATTGA 53988 || | ||||| || ||||| ||| | || |||||| | || | Sbjct 27764 CAACCAGAGCTGATGGCTGAAGTCAGTTCGTATTTCTTTCCAGTCTTGGCAGACAGCTCG 27823 Query 53989 TCCAACATTTGTCGCAACTCTTTTAACAACACCACATACGTTAAACTATCTTTTTGAGGA 54048 | | ||| | || || || || | || | | || || | || || | ||| Sbjct 27824 TTAAGCATCTCTCTCAGTTCCTTCATCAGCTCGACGTAGATGTGACCGTCATC---AGGG 27880 Query 54049 TCGCCCACGGACGGATTGGCACCGTTTCCGCCAGGAAACTCCCAATCGACGTCGACACCA 54108 || | || || || || || || ||||| |||||||| || | ||| || ||| Sbjct 27881 CTACCGAGATCAGGGTTAGCGCCCTTACCACCAGGGAACTCCCAGTCAATGTCCACTCCA 27940 Query 54109 TCAAAAAATTTCCACGTCAATAGGAATTCGCGCACGGAATCCACAAACACTTTGCGTTTG 54168 ||||| |||||||| || ||||| || ||| || || || || || | || Sbjct 27941 TCAAAGAATTTCCAGGTTTCAAGGAAGTCCTTCACAGAGTCAACGAAGCGCTTCCTCTTA 28000 Query 54169 GAAGAATCGTGGAAATGGTAAAACGGATCCGATAACGTCCAACCGCCGATTGACGGTAAT 54228 || ||| | | || ||||| | | |||||||| || | || ||||| Sbjct 28001 ACCTTGTCAGTGAAGAAGAAGAATGGATCAGCCAGGGTCCAACCACCAACGGAAGGTAAG 28060 Query 54229 ACTTTGACGTTGGGATTCGCTTTTTTCACGGCCATAATCTGTCCAAAATTGCCTTTATAC 54288 | || | || || | || | ||||| ||| | |||||| ||||| || || || Sbjct 28061 ATCTTCAGGTCAGGTCTTGCCTGTTTCAACATCATCAGCTGTCCGAAATTACCCTTGTAG 28120 Query 54289 GGTTCGTTCCAGGCGGAGACGCCTTTTTGCGGTTTTTGCACCGCCGCCCAAGGATCATGG 54348 ||||||||||||| | | || ||||| ||||| || | || |||||||| || || Sbjct 28121 GGTTCGTTCCAGGACGCCAGACCCTTTTGTGGTTTCTGAAGAGCTGCCCAAGGGTCGTGA 28180 Query 54349 ATGGCTACTTTAAAATCCGACCGGCCAGCGCAAGATCTTTGTAGAGCTTCAAAACTGCCC 54408 || | |||||| || ||| || |||| ||| |||| ||| ||||||| || ||||| Sbjct 28181 ATCGATACTTTGAAGTCCTCCCTGCCACTGCAGGATCGTTGCAGAGCTTGGAAGCTGCCT 28240 Query 54409 GGTATAGTTTTTAAACTGTCATTTATTCCGTCGCCGCCGCAAATTGGCACAAAACCGTAC 54468 || ||| |||||||| || || || || || ||||| ||||| | ||||||||| Sbjct 28241 TCGATTTCTTTCAAACTGTCGTTGATGCCATCTCCACCGCAGATTGGGATGAAACCGTAC 28300 Query 54469 AAAAGATGCGTCAAATTAGGCACGGGCACTTTGTCCATTGGAAAATTTCGTCCGTACACT 54528 | |||||| || | ||| || | ||| || ||| | || || || | ||| || Sbjct 28301 AGAAGATGGGTAAGATTCGGGATGGGTACGCGGTCGACGGGGAACTTCCTGGGGTAGACG 28360 Query 54529 CCCCATTCTACAAAATAGGCGGCCACAACTTTGC 54562 |||||||| || || || ||| | ||||| |||| Sbjct 28361 CCCCATTCGACGAAGTAAGCGCCAACAACCTTGC 28394 >seq1608 Length=32450 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || || |||| |||||||||||||| || || Sbjct 30988 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACTATCACTCTTGAAGTGGAGCCTTCT 31047 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || ||||| || || || || || || || Sbjct 31048 GACACTATTGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 31107 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || ||||||| || || |||| || |||||| Sbjct 31108 CAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGACTACAAC 31167 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || ||||||||||||||| |||| ||||| || Sbjct 31168 ATTCAGAAAGAGTCTACTTTGCATTTGGTTTTGCGTCTGCGAGGTGGTAT 31217 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| |||| || || |||| || |||||||| || || ||| Sbjct 29392 ATGCAGATTTTTGTGAAAACCTTGACGGGTAAAACTATCACCCTTGAAGTTGAGCCATCC 29451 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||||||||||||||||||||| || || ||||| Sbjct 29452 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGCATTCCCCCAGATCAG 29511 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || || |||||| || || | || || |||||| Sbjct 29512 CAGCGACTGATCTTCGCTGGAAAGCAGTTAGAAGACGGTCGCACACTGTCTGACTACAAC 29571 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || | || | ||| ||||| | || ||||| || Sbjct 29572 ATCCAAAAAGAATCTACGCTTCACCTTGTTCTGCGTCTCCGTGGTGGTAT 29621 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||| || ||||| || || || Sbjct 29620 ATGCAGATTTTCGTTAAAACGCTTACTGGTAAGACAATTACCCTCGAAGTCGAGCCTTCA 29679 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || || ||||||||||||||||||||| || ||||| || || Sbjct 29680 GATACTATCGAGAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCACCAGACCAG 29739 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | |||||||| || ||||||| | ||| | || || |||||| Sbjct 29740 CAAAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 29799 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || ||| | || |||| ||||| |||| ||||| || Sbjct 29800 ATTCAAAAGGAATCCACCCTTCACCTGGTCCTGCGTCTGCGAGGTGGTAT 29849 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || |||| || || |||| || ||||||||||| || ||| Sbjct 30304 ATGCAGATTTTCGTAAAGACATTGACTGGAAAAACTATCACCCTTGAAGTGGAGCCTTCC 30363 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||||| |||||||| ||||| || || || || || Sbjct 30364 GATACCATTGAAAACGTAAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 30423 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | ||||| | || ||||||| || ||| Sbjct 30424 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACTCTTTCCGACTATAAC 30483 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || ||| | || ||||| |||||| |||| ||||| || Sbjct 30484 ATTCAGAAGGAATCTACCCTTCACTTGGTCTTGCGTCTGCGAGGTGGTAT 30533 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || || | || ||||||||||| || || || Sbjct 29848 ATGCAGATTTTCGTGAAGACATTGACTGGAAAAACCATCACTCTTGAAGTTGAGCCTTCT 29907 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || || || || || || || || || Sbjct 29908 GACACTATTGAGAATGTAAAGGCCAAGATCCAGGATAAGGAGGGAATTCCCCCAGACCAG 29967 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| |||| | ||||||||| || | ||||| | ||| ||||||| || ||| Sbjct 29968 CAGCGTCTAATCTTCGCCGGCAAGCAGCTTGAAGATGGGCGTACCCTTTCCGACTATAAC 30027 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || ||| | || ||||| |||||| |||| ||||| || Sbjct 30028 ATTCAGAAGGAATCTACCCTTCACTTGGTCTTGCGTCTGCGAGGTGGTAT 30077 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || || | || |||||||||||||| || || Sbjct 30532 ATGCAGATTTTCGTGAAGACCCTCACTGGTAAAACCATCACTCTTGAAGTGGAGCCTTCT 30591 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || |||||||| ||||| || || || || || || Sbjct 30592 GACACTATTGAGAATGTGAAAGCTAAGATTCAAGATAAAGAGGGAATTCCCCCAGACCAG 30651 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | ||||| | ||| |||| ||||||||| Sbjct 30652 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGGCGTACCCTTTCTGATTACAAC 30711 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | || ||||| ||||| |||| ||||| || Sbjct 30712 ATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGCGAGGTGGTAT 30761 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || || |||| || || ||||| || || || Sbjct 31216 ATGCAGATTTTCGTGAAGACCTTGACTGGAAAAACTATCACCCTCGAAGTCGAGCCTTCT 31275 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || |||||||| ||||| || || || || || Sbjct 31276 GATACCATCGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 31335 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| |||||||| | ||||| | ||| |||| || |||||| Sbjct 31336 CAGCGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGGCGTACCCTTTCTGACTACAAC 31395 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||||||| | ||||||||||||||| |||| ||||| || Sbjct 31396 ATTCAGAAAGAGTCGACTCTGCATTTGGTTTTGCGTCTGCGAGGTGGTAT 31445 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || || | || || || ||||| ||||| || Sbjct 30076 ATGCAAATTTTCGTGAAGACCCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCTTCT 30135 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || |||||||| ||||| || || || || || Sbjct 30136 GATACCATCGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 30195 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||||||| | ||||| | || |||| || |||||| Sbjct 30196 CAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGACGCACTCTTTCTGACTACAAC 30255 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||||||| | ||||||||||||||| |||| ||||| || Sbjct 30256 ATTCAGAAAGAGTCGACTCTGCATTTGGTTTTGCGTCTGCGTGGTGGTAT 30305 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || || | || || | ||||| ||||| || Sbjct 30760 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACCATCACCTTAGAAGTTGAACCATCT 30819 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || || ||||| ||||| || || || || || Sbjct 30820 GATACCATTGAAAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 30879 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || ||||||| | ||| ||||||| || ||| Sbjct 30880 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGGCGTACCCTTTCCGACTATAAC 30939 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || ||| | || |||||||||||| |||| ||||| || Sbjct 30940 ATTCAGAAGGAATCTACCCTTCACTTGGTTTTGCGTCTGCGTGGTGGTAT 30989 >seq806 Length=81131 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||| |||| || || | || || | || |||||||| || Sbjct 48865 CATGCAGATCTTTGTGAAGACTTTGACGGGGAAAACCATAACATTAGAGGTGGAACCCTC 48806 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || ||| |||||||||||| || |||||||| || |||||||| Sbjct 48805 TGATACCATTGAAAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCTCCCGATCA 48746 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | || || | |||||| |||||||||||||| | || ||||||| ||||| Sbjct 48745 ACAGAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGCACTCTTTCCGACTACAA 48686 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | || ||||| | | ||||| || Sbjct 48685 TATCCAGAAGGAGTCTACTCTTCATCTCGTGCTGCGTCTCAGAGGTGGTAT 48635 Score = 143 bits (158), Expect = 2e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| || ||||| |||||| | || || || | ||||| | ||||| ||||| Sbjct 46102 CGGCATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACC 46043 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | ||||| | |||||| ||||||||||||||||| || || ||||| || Sbjct 46042 CTCTGACACAATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCACCAGA 45983 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 |||||| | || || | ||| || || || | |||||| | || |||||||||| Sbjct 45982 TCAACAAAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACTCTTTCCGATTA 45923 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||| || || | ||||| ||| | | ||| | ||||| || Sbjct 45922 CAATATTCAAAAGGAATCAACACTTCATTTAGTTCTAAGGTTGAGAGGTGGAAT 45869 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| |||| ||||| | || ||| | || || || || || Sbjct 48636 ATGCAAATTTTCGTAAAAACATTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCT 48577 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||| || || || || || || ||||| ||||| Sbjct 48576 GACACAATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAGGGTATCCCACCTGATCAG 48517 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||||||||||| |||||||| | || | || || ||||| Sbjct 48516 CAACGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGACGCACATTATCAGACTACAAT 48457 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || ||| | || || || ||||||||||| || || || Sbjct 48456 ATCCAAAAAGAATCTACCCTTCACTTAGTATTGCGTTTGCGCGGAGGAAT 48407 >seq2205 Length=656796 Score = 118 bits (130), Expect = 9e-22 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26968 AATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTA 27027 ||| |||| | ||||| ||||| || || |||||||| ||||| || ||| |||| Sbjct 562268 AATGTTTTCAGGTATACA--ATGCAAATCTTCGTAAAAACCCTGACGGGTAAGACTATCG 562325 Query 27028 CTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAG 27087 | || |||||||| | || ||| | ||||||| || || ||| ||||| ||||||| Sbjct 562326 CCCTCGAAGTGGAGGCTTCAGACACTATTGAGAATGTGAAGGCAAAGATTCAGGACAAAG 562385 Query 27088 AAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTT 27147 | |||| || || || || || ||| | || | |||||| ||||| |||||||| | Sbjct 562386 AGAGCATCCCGCCAGACCAGCAACGTCTTATCTTCGCCGGTAAACAGTTGGAAGATGGCC 562445 Query 27148 CGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || | | | ||||||||||| ||||| || || || || ||||| Sbjct 562446 GCACTCTCACAAACTACAACATTCAGAAGGAATCCACATTCCACTTGGT 562494 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| ||||| || || | ||||| || || ||||| | || Sbjct 554130 ATGCAAATCTTCGTAAAAACCCTGACGGGTAATACCATTACCCTCGAGGTGGAGGCTTCA 554189 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||| ||||| |||||||| ||| || || || || Sbjct 554190 GACACTATTGAGAATGTGAAGGCAAATATTCAGGACAAAGAGAACATCCCGCCAGACCAG 554249 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| ||||| |||||||| || || | || | |||||| Sbjct 554250 CAACGTCTTATCTTCGCCGGTAAACAGTTGGAAGATAGCCGCACACTCTCAAACTACAAC 554309 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| ||||| || || || || ||||| Sbjct 554310 ATTCAGAAGGAATCCACATTCCACTTGGT 554338 >seq2446 Length=565066 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 49255 CCTATGTTGGCGGACGTGTGCAAATCCATGTCAACGGCGATGAAAAAGTGTCCCGACGGA 49314 ||||||||||| || | |||||||| || || ||| ||||| || ||||| ||||| Sbjct 540514 CCTATGTTGGCTGAAGCTTGCAAATCAGTGGAAATGGCAATGAAGAAATGTCCTAACGGA 540455 Query 49315 ATGTTGGCGGAAATTAAATATGACGGCGAACGTGTGCAAATTCACAAAAAGCGCGAGCGT 49374 ||||| | || || ||||||||||| ||| | || ||| | || ||||| | | Sbjct 540454 ATGTTCTCAGAGATCAAATATGACGGTGAAAGGGTACAAGTGCATAAAAAAGGGAATGAG 540395 Query 49375 TTTCAATTCTATTCAAGATCTTTAAAGTCTGTGAGCGCACATAAA 49419 ||| ||| | || ||| | ||||| |||| | ||||||||| Sbjct 540394 TTTAAATATTTCTCTAGAGCATTAAAACCTGTTATGGCACATAAA 540350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434902226472000