Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1613 111 1e-19 >seq1613 Length=46735 Score = 111 bits (122), Expect = 1e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 |||||| ||| || ||||| || || | | ||||| ||||| || | ||| || ||| Sbjct 40750 GGGTCTCTAATGTATGTGTCAATGAGCAAGGAGTACATCTCAGAGTGAACATTCTCCATA 40809 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 |||||||| |||||||| |||||||| |||||||| ||||| || || | | || | | Sbjct 40810 GCAATCTGGAATCCGTAGAAGCATCTGGCTTCTGTCACTTGCACCTCTTGGGAGAAGCGT 40869 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984 || || ||||| || || || || || ||| || ||||| || |||| ||||| Sbjct 40870 TCCACCAAGTTCTCATTGACAATGCCATCAGACGCAGCAAAGAAAGCCAGCACATG 40925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427034116115675