Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1422 84.2 2e-11 >seq1422 Length=319902 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 |||| || |||| ||| || ||||||| ||||||| ||||||||||| ||||| || Sbjct 30781 TCTAATCCTGTGATGTGGGCAATCATGTGAGTGAGGAATGAGTAGCTGGCAATGTTGAAA 30840 Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCG 27324 || || || |||||||| || | ||| || || ||| |||| || |||| ||| Sbjct 30841 GGAACACCCAGCCCCATATCAGCACTCCTTTGATAAAGCAGACAAGACAGCTTGCCACTT 30900 Query 27325 CTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 ||| | |||||| || | ||||| || || |||||||| Sbjct 30901 GATACATGGAACTGAGCTAAGCAATGGCATGGCGGTAGAGCCAT 30944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369493802477225