Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq160110 118 1e-21
>seq160110
Length=3910
Score = 118 bits (130), Expect = 1e-21
Identities = 284/421 (67%), Gaps = 14/421 (3%)
Strand=Plus/Plus
Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092
|||||| ||||||||||||||||| || |||| | ||||| || || || | |||
Sbjct 2257 TCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTCATGCCAATCA-TCG 2315
Query 16093 -TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATAT 16151
|| || | || | || ||||| | ||||| ||| || ||||| ||| || |
Sbjct 2316 CCACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCTTCGGAAATTATTT 2375
Query 16152 CGGTGGCTCGTGTTTCA---GACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208
| | ||| ||||| || || | || || | |||| |||| || || || |
Sbjct 2376 CAATCACTC---TTTCATTTGAAGGCTTCTGAACTAAATATTTATACATAAGGCAGGCAA 2432
Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268
| || ||||| || ||||| |||| ||| | |||||| || || || || || ||||
Sbjct 2433 AATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTCAAACCAGGCA 2492
Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACC 16326
| | |||||||| || | ||| ||||| || ||||| || | | |||| ||||| ||
Sbjct 2493 TAATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAA--AATATCCC 2550
Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCA 16386
||||| | ||||| || || | || || || | || ||| ||| | ||||||
Sbjct 2551 TTCAACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGCTGGAAATCCA 2610
Query 16387 TTTCTGTA-CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
| || | |||| || || |||| ||| | |||| || |||||| || || || ||||
Sbjct 2611 -TGCTAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTGCATTGAACA 2669
Query 16446 A 16446
|
Sbjct 2670 A 2670
Score = 105 bits (116), Expect = 7e-18
Identities = 175/253 (69%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 16470 TTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCT 16529
||| ||| ||||| |||| | ||||||||||| || || | ||| || || || || |
Sbjct 2754 TTACATATGTATCGATCAAAATGCTGTACATTTCGGAATGCACGTTTTCCATTGCAATTT 2813
Query 16530 GAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCA 16589
|||||||||| ||||| || ||||| | | ||| || ||| ||||||||| | |
Sbjct 2814 GAAATCCATAAAAGCAACGTGCCTCAGTGACTTGCACCTCCTGACTGAATCGTTCCACAA 2873
Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649
| || || || || || |||||| ||| || || ||||| |||| || || ||||
Sbjct 2874 GATTTTCGTTTACAATCCCGTCAGATGCTGCGAAGAACGCTAATACATGAGAAACAAAAT 2933
Query 16650 ATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTT 16709
||| |||||| || | | |||||| | | ||| || || | |||||| || |
Sbjct 2934 GGCGTTCACTAGATGTGAGGTTGTTCCAATCATCCATATCCTTCGAAAGATCCACCTCCT 2993
Query 16710 CTGGCGTCCAAAA 16722
| ||||||||
Sbjct 2994 CAACAGTCCAAAA 3006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 509373882114720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |