Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq220453 104 2e-17 seq157614 95.1 1e-14 seq106419 84.2 2e-11 >seq220453 Length=1779 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | ||||| ||||| || ||||||||||| || |||||| | Sbjct 1714 ATGCAGATTTTCGTTAAAACTTTGACCGGTAAAACCATTACATTGGAGGTTGAACCCTCT 1655 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | ||||| |||||| ||||| ||||| | || |||||| Sbjct 1654 GACACCATTGAAAACGTCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCAG 1595 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| || | ||||| || ||||| || |||||||| || || | || ||||| Sbjct 1594 CAACGATTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTACCTTGTCTGACTACAAC 1535 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||| ||||||||| |||| |||| ||||||| || Sbjct 1534 ATCCAAAAGGAATCAACTCTTCACTTGGTCCTACGTCTACGAGGTGG 1488 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 25148 AGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGA 25207 |||||| ||| | || || || || |||||||||||||||||| || || |||| Sbjct 917 AGATCAGCAACGTCTCATTTTCGCTGGCAAACAATTGGAAGATGGACGCACCTTGTCCGA 858 Query 25208 TTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||| ||||||||||| ||||||||| |||| |||| | ||||| || Sbjct 857 TTACAATATCCAAAAGGAATCAACTCTTCACTTGGTCCTACGTCTTCGAGGTGG 804 >seq157614 Length=1694 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| |||||||| || || || ||||| ||| ||||| | Sbjct 449 ATGCAAATCTTCGTCAAGACATTGACTGGAAAGACTATTACGTTGGAAGTAGAACCTTCC 508 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || || ||||| ||||| | || |||||| Sbjct 509 GATACCATTGAAAATGTTAAGGCTAAGATCCAAGATAAGGAAGGCATCCCACCAGATCAG 568 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || || || || ||||||||||||||| || || ||||||| ||| Sbjct 569 CAACGTTTGATTTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGATTATAAT 628 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||||| ||||| | || | || ||||| ||||||||||| Sbjct 629 ATTCAGAAGGAGTCTACATTGCATTTAGTATTACGTTTACGAGGAGG 675 >seq106419 Length=8549 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 || |||||| || ||| |||| || ||||| ||||| ||||| ||| ||| || || Sbjct 1667 AATAATGCAGATTTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCC 1608 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 |||| || | | || | ||| || || || || ||||| | ||| ||| Sbjct 1607 ATCAGACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 1548 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||| ||| | | ||||| || |||||||||||||||||| || | | || || Sbjct 1547 TCAGCAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCGGACTA 1488 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||| || || ||||| || || |||||| ||||| | || | ||||| || Sbjct 1487 CAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGAGGTGG 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409198717775144