Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq106419 125 7e-24 seq8809 116 4e-21 seq160110 114 1e-20 seq220453 113 5e-20 seq129547 82.4 8e-11 >seq106419 Length=8549 Score = 125 bits (138), Expect = 7e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || || | || ||||| ||||||||| |||| ||||| || Sbjct 1667 AATAATGCAGATTTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTCGA-GC 1609 Query 40746 CACC-GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || | |||| | | | | | |||| || || | ||||| || ||||| ||| | | Sbjct 1608 CATCAGACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAG 1549 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | |||||||| | |||| ||| |||||||| |||| || | |||||||| |||| Sbjct 1548 ATCAGCAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCGGACT 1489 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||||||| |||| || || Sbjct 1488 ACAACATCCAGAAGGAGTCCACCCTTCA 1461 >seq8809 Length=5998 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || ||||||||||| |||||||| | || ||||| | | Sbjct 4331 ATGCAGATTTTCGTAAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGCCTTCG 4390 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | || || | ||||||||||| || || | |||||| Sbjct 4391 GACACTATCGAAAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCAGACCAG 4450 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| ||| |||||||| |||| || | ||||| || ||| ||||| Sbjct 4451 CAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACTCTGTCCGATTACAAT 4510 Query 40870 ATCCAGAAGGAGGCCAC 40886 |||||||| ||| |||| Sbjct 4511 ATCCAGAAAGAGTCCAC 4527 >seq160110 Length=3910 Score = 114 bits (126), Expect = 1e-20 Identities = 170/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 ||||||| || || || ||||| || ||||||||||| || || ||||| | | || | Sbjct 3020 AGGCCGAAGCATCATTTTGGACTGTTGAGGAGGTGGATCTTTCGAAGGATATGGATGATT 2961 Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774 || | | | | | || |||||||| | || || | || || ||||| | Sbjct 2960 GGAACAACCTCACATCTAGTGAACGCCATTTTGTTTCTCATGTATTAGCGTTCTTCGCAG 2901 Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834 | ||||| || || ||||| ||||| || || || ||| |||||||||||| || Sbjct 2900 CATCTGACGGGATTGTAAACGAAAATCTTGTGGAACGATTCAGTCAGGAGGTGCAAGTCA 2841 Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894 | ||||| || ||||| || || ||||| || || ||||| |||||||| || ||||||| Sbjct 2840 CTGAGGCACGTTGCTTTTATGGATTTCAAATTGCAATGGAAAACGTGCATTCCGAAATGT 2781 Query 116895 A 116895 | Sbjct 2780 A 2780 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004 ||||| || || || || ||| |||| || || ||| | ||||| || ||||| | Sbjct 2670 TTGTTCAATGCAATTGAAACGTTGCCTTGTGTTAAAAAAAAGGCAGATTGGGCTTTAGCA 2611 Query 117005 TGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAG 117064 ||||| || ||| | || | || | ||||| | | || || || || || || Sbjct 2610 TGGATTTCCAGCAAATCTGCAACATTTGCAGAGCGGATTATTGCGTTTGCTGCAGTTGAA 2551 Query 117065 GGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATG 117124 || | || || |||||||| || || |||||||||||||| ||||| || | ||| Sbjct 2550 GGGATATTTTTCAGCGGCAGTTTTGCAGCAATATTTTGGCTCAAAAAACGAGGTATTATG 2491 Query 117125 CCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTT 117184 || || |||| ||| ||||| | ||||| | || || || || ||||| || ||| Sbjct 2490 CCTGGTTTGACATTCTCTAACGAATTAATCTCACGAGATGAAGGGCTCCATTGTGATTTT 2431 Query 117185 GCCTG 117189 ||||| Sbjct 2430 GCCTG 2426 >seq220453 Length=1779 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || ||||| || | || || || || || Sbjct 802 ATGCAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCC 743 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||||| |||||| ||||| | ||||| || || || ||| | || || Sbjct 742 GATACTATTGAAAACG-TCAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGATCA 684 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | || || ||||| || || || | |||||| | ||||||||| Sbjct 683 GCAGCGTCTCATTTTTGCCGGAAAACAACTAGAAGATGGGCGCACTTTGTCCGACTACAA 624 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| | || || ||| | |||||||| Sbjct 623 CATTCAGAAGGAGTCTACTCTACATTTGGTGTTGCG 588 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747 |||||| || ||||| ||||| | || || || || ||||| | || ||||| |||| Sbjct 1259 AATGCAGATTTTCGTCAAAACTTTAACCGGAAAGACTATCACTTTGGAAGTCGA-GCCAT 1201 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | ||| | || | ||||||| ||||| || |||||||| | || | Sbjct 1200 CCGATACTATCGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGCATCCCACCAGATC 1141 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| || || | ||| || || || |||| || | |||||| | |||||||| Sbjct 1140 AGCAACGTCTTATTTTCGCCGGTAAGCAATTGGAAGATGGGCGCACTTTGTCCGACTACA 1081 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||| | || || ||| | |||||||| Sbjct 1080 ACATTCAGAAGGAGTCTACTCTACATTTGGTGTTGCG 1044 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || || |||||||| || | || || ||| || | Sbjct 1714 ATGCAGATTTTCGTTAAAACTTTGACCGGTAAAACCATTACATTGGAGGTTGAACCCTCT 1655 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | ||||| |||||| ||||||| || || || || || || | || || Sbjct 1654 GACACCATTGAAAACG-TCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCA 1596 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||||| | |||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct 1595 GCAACGATTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTACCTTGTCTGACTACAA 1536 Query 40869 CATCCAGAAGGA 40880 |||||| ||||| Sbjct 1535 CATCCAAAAGGA 1524 >seq129547 Length=22140 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || || |||||||| | || ||||| || Sbjct 20066 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAGCTTTCC 20125 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| || || | || || || || || ||| | || || Sbjct 20126 GATACGATCGAGAACG-TCAAGGCTAAGATCCAGGATAAGGAAGGAATTCCCCCAGATCA 20184 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || || ||| ||| |||| |||||| | || ||||| Sbjct 20185 GCAACGTTTGATCTTCGCCGGAAAGTAGCAGGAGGACGGTCGCACCTTGTCTGATTACAA 20244 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 20245 CATCCAGAAGGAGTCGACCCTCCA 20268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513163501152960