Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq105684 147 3e-30 seq128794 141 1e-28 seq157614 140 5e-28 seq220453 120 5e-22 >seq105684 Length=4320 Score = 147 bits (162), Expect = 3e-30 Identities = 337/504 (67%), Gaps = 5/504 (1%) Strand=Plus/Minus Query 205309 TCTACTTGTCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttt 205368 ||||| | ||| || || | ||||||||||||||| |||| | || || || | | Sbjct 2150 TCTACCTTTCTCTTAATGTACAATTTTGGAAATGGGCGTGGTTCCCTTTGCAACTGCTCT 2091 Query 205369 tttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCA 205428 ||||| | || ||||| | ||| | ||| || | |||| | |||| ||| || Sbjct 2090 TTTAACGGCTCAACGTGATTTAAATAAACATGAGCGTCGCCAAGTGTGTGAACAAAGTCG 2031 Query 205429 TATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACA 205488 ||||| || || | ||| |||||||| ||||||| || |||||| || | | Sbjct 2030 CCAGGTTTCAATCCGGTAACATGGGCAATCATGTAAGTCAGCAATGCATAACTCGCGATA 1971 Query 205489 TTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATAT 205548 || || || || || | |||||||| || || ||||||||||| ||||||| ||| | Sbjct 1970 TTGAAAGGCACTCCCAGCCCCATATCTGCCGACCTTTGATACATCTGACATGAAAGCTCC 1911 Query 205549 TTATTATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCA 205608 ||| | || | || || || | ||||||||| ||||| | |||| || Sbjct 1910 CCATTCGCA---ACGTAGAACTGGACGAGACAATGACAGGGTGGAAGTGCCATTTTAGGG 1854 Query 205609 ACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttatt 205668 | ||||| ||||||||||| || | || ||| | | || || | || ||| Sbjct 1853 ATGTCTATCGGATTCCAGGCGGTCATGATAATACGCCGGTCATTTGGGTTCGTCTTGATT 1794 Query 205669 ttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAAT-TTGTATCCATATC 205727 || | || | | | | |||||||| ||| || || || | | | | || | Sbjct 1793 CTAGTAATCACCTCATTCAGTTGATCAATTCCCTGGCCCGTGTAGTCGTCTTTGCAGGT- 1735 Query 205728 AATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 |||| | ||||||| ||||||||||||||| |||||||| || |||| ||| ||||| Sbjct 1734 TTTATACTCCGCACCAATATGACGCCATTGAAACCCATAAACAGGGCCTAGATCTCCTTC 1675 Query 205788 TTTTCTATCATTAAAACCACGTTT 205811 | | |||| ||||||||| ||| Sbjct 1674 CTCACGATCAGTAAAACCACATTT 1651 >seq128794 Length=4683 Score = 141 bits (156), Expect = 1e-28 Identities = 263/386 (68%), Gaps = 6/386 (2%) Strand=Plus/Plus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 |||||||||||||| ||||| |||||||| | | || |||||||| || | Sbjct 1488 CCAACATATCCATTAGGATCGCGTCCATCCAAACTGTACTTATCATTCAAGTAAATGGCA 1547 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || |||| || ||||||| ||||||||||| ||||| || |||||||||||| Sbjct 1548 ACCTGTAACGCTTTCTCCGGTGATTCGGTCCATTCTAAAATTTTCTTCGCCCAATACATT 1607 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 | | | ||||||| ||||| | | | | | ||| | || | | |||||| | | Sbjct 1608 CGCAGAAATCCATGAATTTTCGCCTCTTTTACTAGTTGAATCTGAGCCGAATTCCACAGA 1667 Query 203048 TTGTCATGAGTTAATGCATTTTCAAGTTGAT--ATAAACTATATATATGTTTTCTAGTAT 203105 | ||| || ||| ||||||||| | || | | || ||||| || || ||| Sbjct 1668 TCGTCGTGCGTTTTTGCATTTTCCAATTCGTCCGTTGTGTAGATATAAGTCCGCT--TAT 1725 Query 203106 CATTTTTATGTTCATTTAGTGTTTTTATTGCCCA-ATTATTAGCACCATTTATATTATCG 203164 | ||| ||| ||| || |||||| ||||| | ||| || |||| | |||| Sbjct 1726 CTTTTCGATGATCAGAAAGAGTTTTTTCAGCCCACGATGCGAGC-CCTTTTAAACTATCA 1784 Query 203165 TAATTTTCATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTTCA 203224 || | |||||| ||| ||||||| || ||| | || || | | ||||||||||||| Sbjct 1785 TAGTGTTCATTGTAAAAACAAAAGTTGTCAGAAAGCTCACGTCTTACAATAGCTTCTTCA 1844 Query 203225 CAAAAAACTTCTACCGATTTAGGATA 203250 ||||| | ||||||||| |||||| Sbjct 1845 CAAAAGGCAGCTACCGATTCAGGATA 1870 >seq157614 Length=1694 Score = 140 bits (154), Expect = 5e-28 Identities = 182/252 (72%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | |||||| | || || || ||||| || | || | ||| | Sbjct 449 ATGCAAATCTTCGTCAAGACATTGACTGGAAAGACTATTACGTTGGAAGTAGAACCTTCC 508 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || || |||||||| ||||| || ||||| ||||| Sbjct 509 GATACCATTGAAAATGTTAAGGCTAAGATCCAAGATAAGGAAGGCATCCCACCAGATCAG 568 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || ||||||||||| || ||| |||| || || ||||||||| Sbjct 569 CAACGTTTGATTTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGATTATAAT 628 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATTCA 124778 ||||| || || || || |||||||| || |||||||||||||| || | | || ||| Sbjct 629 ATTCAGAAGGAGTCTACATTGCATTTAGTATTACGTTTACGAGGAGGAAATTAAGATTTT 688 Query 124779 TAAAAATTGATT 124790 |||| ||||| Sbjct 689 GAAAATGTGATT 700 >seq220453 Length=1779 Score = 120 bits (132), Expect = 5e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||| ||||| || ||||| || || || ||||| ||| | || ||||| || |||||| Sbjct 1402 AAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAGCAACGTCTCATTTTCGCCGGAAAA 1343 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || || || ||| |||| || ||| ||||| || ||||| |||||||||||||||||| Sbjct 1342 CAGTTGGAAGATGGTCGTACCTTATCCGATTACAACATTCAGAAAGAATCAACTTTGCAT 1283 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| | ||| | || ||||| || Sbjct 1282 TTGGTGCTCCGTCTCCGTGGTGGAAT 1257 Score = 118 bits (130), Expect = 2e-21 Identities = 169/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| |||| || |||||||| || | || | || || Sbjct 1030 ATGCAGATCTTCGTTAAGACCTTAACTGGAAAAACTATTACATTGGAAGTCGAGCCATCC 971 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | ||| || |||||||| || ||||| || || || ||||| Sbjct 970 GACACTATCGAGAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGATCAG 911 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || |||||||| || ||| | || || || ||||| ||| Sbjct 910 CAACGTCTCATTTTCGCTGGCAAACAATTGGAAGATGGACGCACCTTGTCCGATTACAAT 851 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| ||||||||| | || ||||| ||||| | ||||||||||| ||| || Sbjct 850 ATCCAAAAGGAATCAACTCTTCACTTGGTCCTACGTCTTCGAGGTGGTATGCAAATTT 793 Score = 100 bits (110), Expect = 4e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || | || || ||||| || || | ||| ||||| | | Sbjct 1714 ATGCAGATTTTCGTTAAAACTTTGACCGGTAAAACCATTACATTGGAGGTTGAACCCTCT 1655 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || |||||||||||||| ||||| || || || ||||| Sbjct 1654 GACACCATTGAAAACGTCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCAG 1595 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || || || || || || | || ||| |||| || || || || || Sbjct 1594 CAACGATTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTACCTTGTCTGACTACAAC 1535 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| ||||||||| | || ||||| ||||| ||||||||||||| ||| || Sbjct 1534 ATCCAAAAGGAATCAACTCTTCACTTGGTCCTACGTCTACGAGGTGGTATGCAAATTT 1477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752441768332800