Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq160110 152 5e-32 >seq160110 Length=3910 Score = 152 bits (168), Expect = 5e-32 Identities = 293/430 (68%), Gaps = 4/430 (1%) Strand=Plus/Plus Query 16052 AATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTC 16111 ||||| ||| | |||||| || ||||||||||||||||| ||| | ||| ||| Sbjct 2243 AATTCATTCAAGAGTCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTC 2302 Query 16112 ATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCT 16171 || || || | || || | ||| || || ||||| | | ||| || | || ||| Sbjct 2303 ATGCCAATCATCGCCACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCT 2362 Query 16172 TCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAACATT 16231 || ||||| || | ||| |||| | || | | ||| | |||| |||| Sbjct 2363 TCGGAAATTATTTCAATCACTCTTTCATTTGAAGGCTTCTGAACTAAATATTTATACATA 2422 Query 16232 ATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTA 16291 | || |||||||||||||| | ||||| || | ||||| ||||| || ||||| Sbjct 2423 AGGCAGGCAAAATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTC 2482 Query 16292 AGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA--TGAACCAGAAA 16349 | ||| ||||| | ||||||||||| | ||||||||| || ||||| || | |||| Sbjct 2483 AAACCAGGCATAATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAA 2542 Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttac 16409 ||||| ||||||||||| ||||| |||| | ||||| | | ||| | ||| | Sbjct 2543 --AATATCCCTTCAACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGC 2600 Query 16410 tttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTG 16469 | |||||| | |||||||| ||| |||| ||||||||| || | || |||| Sbjct 2601 TGGAAATCCATGCTAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTG 2660 Query 16470 CATTAAATAA 16479 |||| || || Sbjct 2661 CATTGAACAA 2670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460666600245600