Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq220453 122 7e-23 seq106419 93.3 3e-14 >seq220453 Length=1779 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || ||||| | || |||| |||||| |||||||| ||||| ||||||||||| | | Sbjct 1488 CCACCTCGTAGACGTAGGACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGAC 1547 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||||| || ||||| || |||| | || ||| ||||| || Sbjct 1548 AAGGTACGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGATCTGGAGGA 1607 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| ||||| |||||| | | ||| |||||| ||| || Sbjct 1608 ATTCCTTCCTTATCTTGAATTTTAGCCTTGACGTTTTCAATGGTGTCAGAGGGTTCAACC 1667 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || ||| |||| |||||||| ||||| || ||||| ||||| Sbjct 1668 TCCAATGTAATGGTTTTACCGGTCAAAGTTTTAACGAAAATCTGCAT 1714 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | || |||| || | ||||||||||| ||||||||||| |||| Sbjct 1259 TCCACCACGGAGACGGAGCACCAAATGCAAAGTTGATTCTTTCTGAATGTTGTAATCGGA 1318 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || || ||||||||| ||||| || || | || || | ||| ||||| ||| Sbjct 1319 TAAGGTACGACCATCTTCCAACTGTTTTCCGGCGAAAATGAGACGTTGCTGATCTGGGGG 1378 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||| || |||| |||||| | | ||| ||| || |||||| Sbjct 1379 GATTCCTTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATAGTATCGGAGGGCTCCAC 1438 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| | || ||||||| || || || ||||||||||| Sbjct 1439 TTCCAATGTAATGGTCTTTCCGGTCAGAGTCTTAACGAAAATTTGCAT 1486 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | |||||||| |||||| |||||||| ||||||||||| || |||| Sbjct 348 CCACCACGGAGGCGAAGTACCAAGTGAAGGGTTGATTCCTTTTGAATGTTATAATCGGAA 407 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||||||||||||| || | || || | ||| ||||| || Sbjct 408 AGAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGA 467 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||| || ||| | | || || || | | | |||||| |||||| Sbjct 468 ATTCCTTCCTTGTCTTGAATCT-TAGCTTTAACATTCTCGATAGTGTCGGATGGCTCGAC 526 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || || |||| || || || || || || || || ||||| Sbjct 527 TTCCAATGTAATAGTTTTTCCAGTTAAGGTCTTAACGAAGATCTGCAT 574 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || || || || || || |||||||||||||||| || || | ||||||| Sbjct 1050 ACCAAATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGCCCATCTTCC 1109 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || || | ||||| | ||| ||||| || | ||||||||| || | Sbjct 1110 AATTGCTTACCGGCGAAAATAAGACGTTGCTGATCTGGTGGGATGCCTTCCTTGTCCTGA 1169 Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | || || || | | | | ||| || |||||| ||| | ||||| | || Sbjct 1170 ATTT-TAGCTTTAACATTTTCGATAGTATCGGATGGCTCGACTTCCAAAGTGATAGTCTT 1228 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| || ||||| || ||||| |||||| Sbjct 1229 TCCGGTTAAAGTTTTGACGAAAATCTGCATT 1259 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || || || || || || |||||||||||||||| || || | |||||| Sbjct 594 ACCAAATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGCCCATCTTCT 653 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | |||||| || ||| | || || | || ||||| ||| | |||||||| || Sbjct 654 AGTTGTTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATTCCTTCCTTGTCTTGG 713 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| |||||| | | ||| ||| || |||||| ||| | || ||| | || Sbjct 714 ATTTTAGCCTTGACGTTTTCAATAGTATCGGAGGGCTCCACTTCCAATGTAATGGTCTTT 773 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||| || || || ||||||||||| Sbjct 774 CCGGTCAGAGTCTTAACGAAAATTTGCAT 802 >seq106419 Length=8549 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| || || || || || ||||||||||| | | || | |||| Sbjct 1452 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCT 1511 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||||||||| || |||| | | ||| ||||| ||| | ||||||||| || Sbjct 1512 TCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCC 1571 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | | | ||||| |||||| || | ||||||| | Sbjct 1572 TGGATCTTGGCCTTAACATTCTCGATGGTGTCTGATGGCTCGACCTCGAGGGTGATGGTC 1631 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 ||||||||||| || || || ||||| |||||| || Sbjct 1632 TTGCCGGTCAAAGTCTTGACGAAAATCTGCATTATT 1667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377868275497020