Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq160110 168 6e-37 >seq160110 Length=3910 Score = 168 bits (186), Expect = 6e-37 Identities = 295/426 (69%), Gaps = 10/426 (2%) Strand=Plus/Plus Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762 ||||||||| | ||| || ||||| || ||||| | ||||||||| || || | Sbjct 2257 TCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTCATGCCAATCATCGC 2316 Query 13763 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAAT 13822 || || | | | || ||||| || | ||| || ||| || || ||| || Sbjct 2317 CACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCTTCGGA---AATTAT 2373 Query 13823 TGTAATAA---TCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 | ||| | | ||||| ||||| | || || |||| | || | || ||||| Sbjct 2374 TTCAATCACTCTTTCATTTGAAGGCTTCTGAACTAAATATTTATACATAAGGCAGGCAAA 2433 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 ||||||||| || || ||||||| || | |||||| || ||||| || || ||||| Sbjct 2434 ATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTCAAACCAGGCAT 2493 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAAAAGAATATTCCC 13997 | ||||||||||| | |||||||||||| ||||| || | | |||| ||||| || Sbjct 2494 AATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAA--AATATCCCT 2551 Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14057 ||||||||||||||||| || | || ||| |||| | ||| |||| | || |||||| Sbjct 2552 TCAACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGCTGGAAATCCAT 2611 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | |||||| || | |||||||||| | || || |||||||| ||||| || || Sbjct 2612 GCTAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTGCATTGAACAAG 2671 Query 14118 TATTCC 14123 ||||| Sbjct 2672 AATTCC 2677 Score = 96.9 bits (106), Expect = 3e-15 Identities = 176/252 (70%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 14145 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14204 |||||||| || | | ||| |||||||| || || | ||||||||| || || ||||| Sbjct 2759 TATGTATCGATCAAAATGCTGTACATTTCGGAATGCACGTTTTCCATTGCAATTTGAAAT 2818 Query 14205 CCATAAAAGCATCTAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGCCAAATT 14263 ||||||||||| | || || | ||| || ||| || | |||| ||| | | ||| Sbjct 2819 CCATAAAAGCAACGTGCCTCAGTGACTTGCACCTCCTGACT-GAATCGTTCCACAAGATT 2877 Query 14264 TTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTG 14323 ||| || || || || ||| ||||| || || || |||| | || ||| || | Sbjct 2878 TTCGTTTACAATCCCGTCAGATGCTGCGAAGAACGCTAATACATGAGAAACAAA--ATGG 2935 Query 14324 CTCTTCATT---GTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATC 14380 | |||| | |||| || |||||||| | |||||| |||||||| || || || Sbjct 2936 C-GTTCACTAGATGTGAGGTTGTTCCAATCATCCATATCCTTCGAAAGATCCACCTCCTC 2994 Query 14381 AACTGTCCAAAA 14392 ||| |||||||| Sbjct 2995 AACAGTCCAAAA 3006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477813909266400