Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq160110 168 6e-37
>seq160110
Length=3910
Score = 168 bits (186), Expect = 6e-37
Identities = 295/426 (69%), Gaps = 10/426 (2%)
Strand=Plus/Plus
Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762
||||||||| | ||| || ||||| || ||||| | ||||||||| || || |
Sbjct 2257 TCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTCATGCCAATCATCGC 2316
Query 13763 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAAT 13822
|| || | | | || ||||| || | ||| || ||| || || ||| ||
Sbjct 2317 CACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCTTCGGA---AATTAT 2373
Query 13823 TGTAATAA---TCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879
| ||| | | ||||| ||||| | || || |||| | || | || |||||
Sbjct 2374 TTCAATCACTCTTTCATTTGAAGGCTTCTGAACTAAATATTTATACATAAGGCAGGCAAA 2433
Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939
||||||||| || || ||||||| || | |||||| || ||||| || || |||||
Sbjct 2434 ATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTCAAACCAGGCAT 2493
Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAAAAGAATATTCCC 13997
| ||||||||||| | |||||||||||| ||||| || | | |||| ||||| ||
Sbjct 2494 AATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAA--AATATCCCT 2551
Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14057
||||||||||||||||| || | || ||| |||| | ||| |||| | || ||||||
Sbjct 2552 TCAACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGCTGGAAATCCAT 2611
Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117
| |||||| || | |||||||||| | || || |||||||| ||||| || ||
Sbjct 2612 GCTAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTGCATTGAACAAG 2671
Query 14118 TATTCC 14123
|||||
Sbjct 2672 AATTCC 2677
Score = 96.9 bits (106), Expect = 3e-15
Identities = 176/252 (70%), Gaps = 8/252 (3%)
Strand=Plus/Plus
Query 14145 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14204
|||||||| || | | ||| |||||||| || || | ||||||||| || || |||||
Sbjct 2759 TATGTATCGATCAAAATGCTGTACATTTCGGAATGCACGTTTTCCATTGCAATTTGAAAT 2818
Query 14205 CCATAAAAGCATCTAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGCCAAATT 14263
||||||||||| | || || | ||| || ||| || | |||| ||| | | |||
Sbjct 2819 CCATAAAAGCAACGTGCCTCAGTGACTTGCACCTCCTGACT-GAATCGTTCCACAAGATT 2877
Query 14264 TTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTG 14323
||| || || || || ||| ||||| || || || |||| | || ||| || |
Sbjct 2878 TTCGTTTACAATCCCGTCAGATGCTGCGAAGAACGCTAATACATGAGAAACAAA--ATGG 2935
Query 14324 CTCTTCATT---GTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATC 14380
| |||| | |||| || |||||||| | |||||| |||||||| || || ||
Sbjct 2936 C-GTTCACTAGATGTGAGGTTGTTCCAATCATCCATATCCTTCGAAAGATCCACCTCCTC 2994
Query 14381 AACTGTCCAAAA 14392
||| ||||||||
Sbjct 2995 AACAGTCCAAAA 3006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477813909266400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |