Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq160110 167 2e-36 >seq160110 Length=3910 Score = 167 bits (184), Expect = 2e-36 Identities = 288/417 (69%), Gaps = 6/417 (1%) Strand=Plus/Plus Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550 ||||||||| | ||| || ||||| || ||||| | ||||||||| || || | Sbjct 2257 TCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTCATGCCAATCATCGC 2316 Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 13610 || || | | | || ||||| || | ||| || ||| || ||| ||| || Sbjct 2317 CACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCTTCGGA---AATTAT 2373 Query 13611 CTTAATAA---TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667 | ||| | | ||||| ||||| | || || |||| | || | || ||||| Sbjct 2374 TTCAATCACTCTTTCATTTGAAGGCTTCTGAACTAAATATTTATACATAAGGCAGGCAAA 2433 Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727 ||||||||| || || ||||||| || | |||||| || ||||| || || ||||| Sbjct 2434 ATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTCAAACCAGGCAT 2493 Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787 | ||||||||||| | |||||||||||| || || ||| || ||||| || || Sbjct 2494 AATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAAAATATCCCTTC 2553 Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTT 13847 ||||||||||||||| || | || ||| |||| | ||| |||| | || |||||| Sbjct 2554 AACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGCTGGAAATCCATGC 2613 Query 13848 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | |||||| || | |||||||||| | || || ||||| ||||||||||| || Sbjct 2614 TAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTGCATTGAACAA 2670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476679254617440