Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_005069.1
Length=46339
Score E
Sequences producing significant alignments: (Bits) Value
seq199907 237 5e-58
seq268900 122 3e-23
>seq199907
Length=6585
Score = 237 bits (262), Expect = 5e-58
Identities = 300/413 (73%), Gaps = 12/413 (3%)
Strand=Plus/Minus
Query 8295 TCGCCAGAATACGCCATGCTCCCAGCTGGGGTTGTTGTTAAATGGGGTGCTGTTGGCGAT 8354
|||||||||||||||||||| || || ||| | |||||||||||| || || |||
Sbjct 4674 TCGCCAGAATACGCCATGCTTCCCGCAGGGACCATCGTTAAATGGGGTAAAGTGGGTGAT 4615
Query 8355 ACCTCCTTAACAA------TGAAGCCGTTGGTTAACTGTAAGGCTGTTGGTGCTACTGGT 8408
||| ||| |||||||| | | |||||||| || ||||||| || |||
Sbjct 4614 ------TTACCAACTGTTTTGAAGCCGCTAGAAAACTGTAAAGCCATTGGTGCCACAGGT 4561
Query 8409 TTAACTGGTGGCTATGTAGATTGCACTACTTTAATCGATACGAATAAACAGTCTATTTCT 8468
|||| ||| ||| ||| |||||||| || ||| |||| ||||| |||| |||||||
Sbjct 4560 CTAACGGGTAGCTTTGTGGATTGCACCACGCTAAAGGATAAAAATAAGCAGTTTATTTCT 4501
Query 8469 GATTTGCCTGAAGGACCTGAAAAATCTTTAGGGTTTATTGACGATCCGGAAAATGAAGAT 8528
||| |||| ||||||||||||||| | | || ||||| || ||||| ||||||| ||||
Sbjct 4500 GATATGCCAGAAGGACCTGAAAAAACACTGGGATTTATCGATGATCCTGAAAATGCAGAT 4441
Query 8529 TTTGCGGCATTGCTTACCGCCGCAGCTGCACGTGAGACTGTACAGTTTTATATGGAATTG 8588
|||||||| || | | || ||| || ||||| || || ||||| | || ||| |
Sbjct 4440 TTTGCGGCTTTTTTGAATGCGGCACAGGCGCGTGAAACGGTGCAGTTCTTCATTGAACTT 4381
Query 8589 CCGAATGGCCGTACAGCCACGCAAATATTAGCGCTTTCAGGTTGGCAGTTGGCCGAGGTT 8648
|| ||| ||||| || || || ||||| | ||||||||| | |||| || ||
Sbjct 4380 CCAAATAAACGTACCGCGACAATGATCTTAGCATTATCAGGTTGGGAAATGGCAGACATT 4321
Query 8649 TCTGCCCCTGCAAATGAAGTGATCCAGATAGAGGTTAAGGGTAAGCAAAATAA 8701
||| || |||| |||||| |||||||| || || ||||||||||| ||
Sbjct 4320 AGTGCGCCAGCAAGTGAAGTTATCCAGATCTCAGTCAAAGGTAAGCAAAACAA 4268
Score = 118 bits (130), Expect = 3e-22
Identities = 120/154 (78%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 9337 AGTT-TGGGTACGTTAGAGGAAGCGGaaaaaaaCTAACAGACTCGCCCTGGCTAAAGTTA 9395
|||| ||||| ||| |||||||||| |||||||||||| |||| |||| || |||||
Sbjct 3747 AGTTATGGGTCCGT-AGAGGAAGCGCAAAAAAACTAACCAACTCACCCTATCTTAAGTTT 3689
Query 9396 ATTTTTCAGCTTGCAGATCGCTGGGGCGAGCCTGATCCGCGCAAAATAGCGGAACTGCCG 9455
||||| || | || || || ||||| |||||||| ||| | ||||| || || ||||
Sbjct 3688 ATTTTCCAATTGGCTGACCGATGGGGTGAGCCTGACCCGAGAAAAATTGCTCAATTGCCT 3629
Query 9456 GTTCATATTATTATGCACTGGCAGGCATTTTTTA 9489
| ||||||| | || ||||||||||||||||
Sbjct 3628 GCCAATATTATCACTCATTGGCAGGCATTTTTTA 3595
>seq268900
Length=1777
Score = 122 bits (134), Expect = 3e-23
Identities = 293/438 (67%), Gaps = 4/438 (1%)
Strand=Plus/Minus
Query 15140 TATCGTGATCAGTCGGAGCGAAAGCAAATGCTTCGTTCTGCAGTTGCCCCTGAGAACGTG 15199
||||| ||||| || || || ||||||||| | ||||| || || || || |||| |||
Sbjct 1116 TATCGGGATCAATCTGAACGCAAGCAAATGTTACGTTCAGCGGTGGCGCCAGAGACTGTG 1057
Query 15200 GTCATTGGTAAAACGGT-TGTATCCGGATTATTGATGTTCGCGGAAGAAGAGCCGGGGGA 15258
|| |||||||||| || ||| || || | | | || || ||||| || ||| ||
Sbjct 1056 GTTGTTGGTAAAACAGTGTGT-TCAGGTCTTCTCTTCTTTGCCGAAGAGGAAAAGGGCGA 998
Query 15259 GCAGCAAGATGGAGAGTGGGTACATTTAGTCATAGTACTGGCCGGCCACCCTATTGATCG 15318
|| |||||| || | || | | | ||| | ||| || | |||||| ||| ||
Sbjct 997 TCAAACAGATGGCGAACGTTTATTTATGGCCATTGCACTTGCGGCCCACCCGATTCATAA 938
Query 15319 GATAGGTCGTATCTGGTTGGGTGATGATTTAATCAGTACCTTTGAAGACTATGCTACCTG 15378
|| || || || ||||| ||||||||| || ||||||| ||| | | | |
Sbjct 937 AATTGGCCGCATTTGGTTAAATGATGATTTGATAGAAACCTTTGGCGACAAGGTCAGTTA 878
Query 15379 GGAACTTCATAATGATCGGTCGACCTGCGACCCTTTCATGCTTGAAAAATGT-CCGTCAT 15437
|| ||||||| | || | || | ||||| | | ||||| ||| || ||||
Sbjct 877 CGAGTTTCATAACGGCCGCACCACAAGTGACCCGTATTTA-TTGAAGCATGCGCCATCAT 819
Query 15438 GGAAAGAGGATATGATAGGTAAAGGGTTGGCATGGCTCAGAGTATCACTCAAGTTTAATG 15497
||||||| || ||||| || || || || ||| | | || |||| || | |||
Sbjct 818 GGAAAGATGACATGATCGGCGAAAATTTAGCGTGGTTGCGGTTAACACTGAAATACGATG 759
Query 15498 CAGAAAAATTCCCGTATGGCTTACCGAATATTAAAGCTGAGGTCTGGGGGAAAAAGTTGT 15557
| ||||||||||| ||||| | || ||| | |||| ||| | ||||| ||| || | |
Sbjct 758 CGGAAAAATTCCCTTATGGTGTGCCTAATGTCAAAGTTGAAATGTGGGGCAAAGAGGTTT 699
Query 15558 ATGACCCACGAACTGGTA 15575
|| || || | |||||
Sbjct 698 TCGATCCGCGCATTGGTA 681
Score = 95.1 bits (104), Expect = 4e-15
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 15907 CGTTCAAATCACAACGGAAACTTCGATGCGTGATGCGACCAATGCCATTTATGGGACTTT 15966
|||| | |||||| | ||| || | |||||||| || ||||| ||||| || || ||
Sbjct 176 CGTTAACATCACACCTGAACTCGCGCTACGTGATGCAACTAATGCGATTTACGGTACCTT 117
Query 15967 CGTTGACTGGGAGCAGCAATCTACCAAGATTGATTTTACTCCAGTTCGCGTGAATGAATG 16026
||| || |||||||||| | || | ||||||| ||||| || |||||||
Sbjct 116 CGTCGATGCCGAGCAGCAATATGTTAAAACTGATTTTGAACCAGTCATTGTTGATGAATG 57
Query 16027 GATTGTCGAAGATGGCTTAGAAATTAAAGAAGATGTTGAT 16066
||||| |||||||| ||||| ||||||||| || | |||
Sbjct 56 GATTGAGGAAGATGGGTTAGAGATTAAAGAAAATATCGAT 17
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147601594428152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |