Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq199907 237 5e-58 seq268900 122 3e-23 >seq199907 Length=6585 Score = 237 bits (262), Expect = 5e-58 Identities = 300/413 (73%), Gaps = 12/413 (3%) Strand=Plus/Minus Query 8295 TCGCCAGAATACGCCATGCTCCCAGCTGGGGTTGTTGTTAAATGGGGTGCTGTTGGCGAT 8354 |||||||||||||||||||| || || ||| | |||||||||||| || || ||| Sbjct 4674 TCGCCAGAATACGCCATGCTTCCCGCAGGGACCATCGTTAAATGGGGTAAAGTGGGTGAT 4615 Query 8355 ACCTCCTTAACAA------TGAAGCCGTTGGTTAACTGTAAGGCTGTTGGTGCTACTGGT 8408 ||| ||| |||||||| | | |||||||| || ||||||| || ||| Sbjct 4614 ------TTACCAACTGTTTTGAAGCCGCTAGAAAACTGTAAAGCCATTGGTGCCACAGGT 4561 Query 8409 TTAACTGGTGGCTATGTAGATTGCACTACTTTAATCGATACGAATAAACAGTCTATTTCT 8468 |||| ||| ||| ||| |||||||| || ||| |||| ||||| |||| ||||||| Sbjct 4560 CTAACGGGTAGCTTTGTGGATTGCACCACGCTAAAGGATAAAAATAAGCAGTTTATTTCT 4501 Query 8469 GATTTGCCTGAAGGACCTGAAAAATCTTTAGGGTTTATTGACGATCCGGAAAATGAAGAT 8528 ||| |||| ||||||||||||||| | | || ||||| || ||||| ||||||| |||| Sbjct 4500 GATATGCCAGAAGGACCTGAAAAAACACTGGGATTTATCGATGATCCTGAAAATGCAGAT 4441 Query 8529 TTTGCGGCATTGCTTACCGCCGCAGCTGCACGTGAGACTGTACAGTTTTATATGGAATTG 8588 |||||||| || | | || ||| || ||||| || || ||||| | || ||| | Sbjct 4440 TTTGCGGCTTTTTTGAATGCGGCACAGGCGCGTGAAACGGTGCAGTTCTTCATTGAACTT 4381 Query 8589 CCGAATGGCCGTACAGCCACGCAAATATTAGCGCTTTCAGGTTGGCAGTTGGCCGAGGTT 8648 || ||| ||||| || || || ||||| | ||||||||| | |||| || || Sbjct 4380 CCAAATAAACGTACCGCGACAATGATCTTAGCATTATCAGGTTGGGAAATGGCAGACATT 4321 Query 8649 TCTGCCCCTGCAAATGAAGTGATCCAGATAGAGGTTAAGGGTAAGCAAAATAA 8701 ||| || |||| |||||| |||||||| || || ||||||||||| || Sbjct 4320 AGTGCGCCAGCAAGTGAAGTTATCCAGATCTCAGTCAAAGGTAAGCAAAACAA 4268 Score = 118 bits (130), Expect = 3e-22 Identities = 120/154 (78%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 9337 AGTT-TGGGTACGTTAGAGGAAGCGGaaaaaaaCTAACAGACTCGCCCTGGCTAAAGTTA 9395 |||| ||||| ||| |||||||||| |||||||||||| |||| |||| || ||||| Sbjct 3747 AGTTATGGGTCCGT-AGAGGAAGCGCAAAAAAACTAACCAACTCACCCTATCTTAAGTTT 3689 Query 9396 ATTTTTCAGCTTGCAGATCGCTGGGGCGAGCCTGATCCGCGCAAAATAGCGGAACTGCCG 9455 ||||| || | || || || ||||| |||||||| ||| | ||||| || || |||| Sbjct 3688 ATTTTCCAATTGGCTGACCGATGGGGTGAGCCTGACCCGAGAAAAATTGCTCAATTGCCT 3629 Query 9456 GTTCATATTATTATGCACTGGCAGGCATTTTTTA 9489 | ||||||| | || |||||||||||||||| Sbjct 3628 GCCAATATTATCACTCATTGGCAGGCATTTTTTA 3595 >seq268900 Length=1777 Score = 122 bits (134), Expect = 3e-23 Identities = 293/438 (67%), Gaps = 4/438 (1%) Strand=Plus/Minus Query 15140 TATCGTGATCAGTCGGAGCGAAAGCAAATGCTTCGTTCTGCAGTTGCCCCTGAGAACGTG 15199 ||||| ||||| || || || ||||||||| | ||||| || || || || |||| ||| Sbjct 1116 TATCGGGATCAATCTGAACGCAAGCAAATGTTACGTTCAGCGGTGGCGCCAGAGACTGTG 1057 Query 15200 GTCATTGGTAAAACGGT-TGTATCCGGATTATTGATGTTCGCGGAAGAAGAGCCGGGGGA 15258 || |||||||||| || ||| || || | | | || || ||||| || ||| || Sbjct 1056 GTTGTTGGTAAAACAGTGTGT-TCAGGTCTTCTCTTCTTTGCCGAAGAGGAAAAGGGCGA 998 Query 15259 GCAGCAAGATGGAGAGTGGGTACATTTAGTCATAGTACTGGCCGGCCACCCTATTGATCG 15318 || |||||| || | || | | | ||| | ||| || | |||||| ||| || Sbjct 997 TCAAACAGATGGCGAACGTTTATTTATGGCCATTGCACTTGCGGCCCACCCGATTCATAA 938 Query 15319 GATAGGTCGTATCTGGTTGGGTGATGATTTAATCAGTACCTTTGAAGACTATGCTACCTG 15378 || || || || ||||| ||||||||| || ||||||| ||| | | | | Sbjct 937 AATTGGCCGCATTTGGTTAAATGATGATTTGATAGAAACCTTTGGCGACAAGGTCAGTTA 878 Query 15379 GGAACTTCATAATGATCGGTCGACCTGCGACCCTTTCATGCTTGAAAAATGT-CCGTCAT 15437 || ||||||| | || | || | ||||| | | ||||| ||| || |||| Sbjct 877 CGAGTTTCATAACGGCCGCACCACAAGTGACCCGTATTTA-TTGAAGCATGCGCCATCAT 819 Query 15438 GGAAAGAGGATATGATAGGTAAAGGGTTGGCATGGCTCAGAGTATCACTCAAGTTTAATG 15497 ||||||| || ||||| || || || || ||| | | || |||| || | ||| Sbjct 818 GGAAAGATGACATGATCGGCGAAAATTTAGCGTGGTTGCGGTTAACACTGAAATACGATG 759 Query 15498 CAGAAAAATTCCCGTATGGCTTACCGAATATTAAAGCTGAGGTCTGGGGGAAAAAGTTGT 15557 | ||||||||||| ||||| | || ||| | |||| ||| | ||||| ||| || | | Sbjct 758 CGGAAAAATTCCCTTATGGTGTGCCTAATGTCAAAGTTGAAATGTGGGGCAAAGAGGTTT 699 Query 15558 ATGACCCACGAACTGGTA 15575 || || || | ||||| Sbjct 698 TCGATCCGCGCATTGGTA 681 Score = 95.1 bits (104), Expect = 4e-15 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 15907 CGTTCAAATCACAACGGAAACTTCGATGCGTGATGCGACCAATGCCATTTATGGGACTTT 15966 |||| | |||||| | ||| || | |||||||| || ||||| ||||| || || || Sbjct 176 CGTTAACATCACACCTGAACTCGCGCTACGTGATGCAACTAATGCGATTTACGGTACCTT 117 Query 15967 CGTTGACTGGGAGCAGCAATCTACCAAGATTGATTTTACTCCAGTTCGCGTGAATGAATG 16026 ||| || |||||||||| | || | ||||||| ||||| || ||||||| Sbjct 116 CGTCGATGCCGAGCAGCAATATGTTAAAACTGATTTTGAACCAGTCATTGTTGATGAATG 57 Query 16027 GATTGTCGAAGATGGCTTAGAAATTAAAGAAGATGTTGAT 16066 ||||| |||||||| ||||| ||||||||| || | ||| Sbjct 56 GATTGAGGAAGATGGGTTAGAGATTAAAGAAAATATCGAT 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147601594428152