Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq160110 127 2e-24 >seq160110 Length=3910 Score = 127 bits (140), Expect = 2e-24 Identities = 281/417 (67%), Gaps = 6/417 (1%) Strand=Plus/Plus Query 12982 TCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTT 13041 ||| ||||| ||||| ||||| ||||| ||| | ||| ||||| || || | Sbjct 2257 TCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTCATGCCAATCATCGC 2316 Query 13042 TACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTC 13101 || || | || || || ||||| | | ||| || ||||||||| || ||| || Sbjct 2317 CACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCTTCGGAAATTATTTC 2376 Query 13102 TCTTATTACGTTCTCTAATGGAGGATT-TGA--TAGATGCTTAAACATCATACATGCAAA 13158 | | | | ||| | || ||| || ||| || || ||| |||| | || ||||| Sbjct 2377 AATCACT-CTTTCATT--TGAAGGCTTCTGAACTAAATATTTATACATAAGGCAGGCAAA 2433 Query 13159 ATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT 13218 |||||| || | |||||||||| |||| ||||| || ||||| | ||| ||||| Sbjct 2434 ATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTCAAACCAGGCAT 2493 Query 13219 AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTC 13278 || ||||||||||| | ||||||||| || ||||| || |||||||| ||||| Sbjct 2494 AATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAAAATATCCCTTC 2553 Query 13279 AACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTT 13338 |||||| |||||||| || | || || || | || | ||| || ||||| Sbjct 2554 AACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGCTGGAAATCCATGC 2613 Query 13339 TCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAA 13395 | ||||| | ||| |||| |||||| || || |||| ||||| || || || Sbjct 2614 TAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTGCATTGAACAA 2670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429305791728792