Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq102409 167 5e-37 >seq102409 Length=8602 Score = 167 bits (184), Expect = 5e-37 Identities = 241/340 (71%), Gaps = 0/340 (0%) Strand=Plus/Minus Query 27901 CGCATTTTCGGCATACGTGTTGCCGAGCCTCATCACGACGGAACGCCGCATTGGCACATG 27960 || |||||||| || ||||| || ||||| || || || | ||| || |||||||||||| Sbjct 2470 CGGATTTTCGGTATTCGTGTGGCAGAGCCGCACCATGATGCAACCCCACATTGGCACATG 2411 Query 27961 CTTATGTTCATGTTGCCAGAAGACGTCGAGCGCGTGCGCCTCATCATCCGCGATTATGCA 28020 || | || ||||||||||| | | || || | ||| || | | || |||||| Sbjct 2410 CTGTTTTTTATGTTGCCAGAGCAAGCGGATAGCATCCGCGAAATTCTTAGGGAATATGCA 2351 Query 28021 TGGGAGGAAGACCGCCACGAACTTAAAAGTGATAAGGCTAAAAAAGCCCGCTTTCATGCT 28080 | || ||||| |||||||| | || || || ||||||||| || ||||| Sbjct 2350 TTTGAAGAAGATGAAAGCGAACTTATTACTGCCAAAGCCCGAAAAGCCCGTTTCCATGCC 2291 Query 28081 GAGGCTATCGACCCGGAGAAAGGCAGTGCTACCGGCTATGTCGCGAAATACATTTCTAAA 28140 || || |||||||| || ||||| || || |||||||| || || |||||||||||| Sbjct 2290 GAAGCCATCGACCCTGAAAAAGGTTCAGCAACAGGCTATGTGGCCAAGTACATTTCTAAA 2231 Query 28141 AACATCGACGGTTATGCTCTCGATGGTGAAACCGATGACGAAAGCGGTGAGCTGCTGAAA 28200 || | || |||||||| || |||| ||| ||||| ||||| || | | | ||||| Sbjct 2230 AATGTGGATGGTTATGCGCTTGATGAAGAATTAGATGATGAAAGTGGCAAACCGATGAAA 2171 Query 28201 GAGACAGCCCCCGCTGTATCAGCATGGGCGGCGCGCTGGC 28240 ||| | || |||| | |||||||| | ||| |||| Sbjct 2170 GAGGCGGCAATGGCTGCCGCTGCATGGGCTGGGCGTTGGC 2131 Score = 111 bits (122), Expect = 3e-20 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 28243 ATCCGTCAGTTTCAGTTTATCGGCGGTGCGCCGGTGACGGTCTACCGTGAATTGCGTCGT 28302 || ||||||||||| ||||| || || || || || || || ||||||||||| || Sbjct 1960 ATACGTCAGTTTCAATTTATTGGTGGCGCACCTGTTACCGTTTACCGTGAATTACGCAAG 1901 Query 28303 CTCGCTGATACCGAGGCCGCGCACGGTCTGAGCGTTGAGTTTGCCGCCGTCCATGATGCC 28362 | || ||| ||| | ||| ||| || || |||||||| | || ||||||||| Sbjct 1900 ATGGCCGATCACGATACTGCGGTGGGTTTGGATGTGGAGTTTGCTGTTGTACATGATGCC 1841 Query 28363 GCTGACGCCGGTGACTGGGCTGGTTACGTTAATGCGCAGGGTGGGCCGTTTGTCCGTCGC 28422 |||||| | || || |||||||| || | ||||| || ||||| || ||||| ||||| Sbjct 1840 GCTGACTCAGGGGATTGGGCTGGCTATATCAATGCACAAGGTGGCCCATTTGTGCGTCGT 1781 Query 28423 GATGAT 28428 || ||| Sbjct 1780 GACGAT 1775 Score = 91.5 bits (100), Expect = 3e-14 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 27664 AACCCTGCGATACGCCGCTGCGAGCTGATGACCCGCATCCGTGGGTTTGAAAATATCTGC 27723 |||||||| || || || || ||||| | | || || || |||||||||||||| Sbjct 2892 AACCCTGCCATTCGTCGTACTGAAATGATGGTCAGAATTCGCGGCTTTGAAAATATCTGT 2833 Query 27724 AATGAACTCGGATACGTCGGGGAGTTTTACACCCTGACCGCACCGTCTAAATATCATGCC 27783 ||||| || || || | | || |||||||| | || || || ||||||||||||||| Sbjct 2832 AATGAGCTTGGCTATATTGCAGAATTTTACACATTAACAGCCCCATCTAAATATCATGCC 2773 Query 27784 ACGACTAAAGCGGGATACCGTAACAGCAAATGGAACGGCGCCAGCCCGTCGGACACGCAG 27843 || || | | || ||||||| |||| ||||| ||| ||| || | || || ||| Sbjct 2772 ACTACCATACACGGTCACCGTAATCGCAAGTGGAATGGCAGCAGTCCAGCCGATACACAG 2713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97542463150096