Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_005340.1
Length=30636
Score E
Sequences producing significant alignments: (Bits) Value
seq102409 167 5e-37
>seq102409
Length=8602
Score = 167 bits (184), Expect = 5e-37
Identities = 241/340 (71%), Gaps = 0/340 (0%)
Strand=Plus/Minus
Query 27901 CGCATTTTCGGCATACGTGTTGCCGAGCCTCATCACGACGGAACGCCGCATTGGCACATG 27960
|| |||||||| || ||||| || ||||| || || || | ||| || ||||||||||||
Sbjct 2470 CGGATTTTCGGTATTCGTGTGGCAGAGCCGCACCATGATGCAACCCCACATTGGCACATG 2411
Query 27961 CTTATGTTCATGTTGCCAGAAGACGTCGAGCGCGTGCGCCTCATCATCCGCGATTATGCA 28020
|| | || ||||||||||| | | || || | ||| || | | || ||||||
Sbjct 2410 CTGTTTTTTATGTTGCCAGAGCAAGCGGATAGCATCCGCGAAATTCTTAGGGAATATGCA 2351
Query 28021 TGGGAGGAAGACCGCCACGAACTTAAAAGTGATAAGGCTAAAAAAGCCCGCTTTCATGCT 28080
| || ||||| |||||||| | || || || ||||||||| || |||||
Sbjct 2350 TTTGAAGAAGATGAAAGCGAACTTATTACTGCCAAAGCCCGAAAAGCCCGTTTCCATGCC 2291
Query 28081 GAGGCTATCGACCCGGAGAAAGGCAGTGCTACCGGCTATGTCGCGAAATACATTTCTAAA 28140
|| || |||||||| || ||||| || || |||||||| || || ||||||||||||
Sbjct 2290 GAAGCCATCGACCCTGAAAAAGGTTCAGCAACAGGCTATGTGGCCAAGTACATTTCTAAA 2231
Query 28141 AACATCGACGGTTATGCTCTCGATGGTGAAACCGATGACGAAAGCGGTGAGCTGCTGAAA 28200
|| | || |||||||| || |||| ||| ||||| ||||| || | | | |||||
Sbjct 2230 AATGTGGATGGTTATGCGCTTGATGAAGAATTAGATGATGAAAGTGGCAAACCGATGAAA 2171
Query 28201 GAGACAGCCCCCGCTGTATCAGCATGGGCGGCGCGCTGGC 28240
||| | || |||| | |||||||| | ||| ||||
Sbjct 2170 GAGGCGGCAATGGCTGCCGCTGCATGGGCTGGGCGTTGGC 2131
Score = 111 bits (122), Expect = 3e-20
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 28243 ATCCGTCAGTTTCAGTTTATCGGCGGTGCGCCGGTGACGGTCTACCGTGAATTGCGTCGT 28302
|| ||||||||||| ||||| || || || || || || || ||||||||||| ||
Sbjct 1960 ATACGTCAGTTTCAATTTATTGGTGGCGCACCTGTTACCGTTTACCGTGAATTACGCAAG 1901
Query 28303 CTCGCTGATACCGAGGCCGCGCACGGTCTGAGCGTTGAGTTTGCCGCCGTCCATGATGCC 28362
| || ||| ||| | ||| ||| || || |||||||| | || |||||||||
Sbjct 1900 ATGGCCGATCACGATACTGCGGTGGGTTTGGATGTGGAGTTTGCTGTTGTACATGATGCC 1841
Query 28363 GCTGACGCCGGTGACTGGGCTGGTTACGTTAATGCGCAGGGTGGGCCGTTTGTCCGTCGC 28422
|||||| | || || |||||||| || | ||||| || ||||| || ||||| |||||
Sbjct 1840 GCTGACTCAGGGGATTGGGCTGGCTATATCAATGCACAAGGTGGCCCATTTGTGCGTCGT 1781
Query 28423 GATGAT 28428
|| |||
Sbjct 1780 GACGAT 1775
Score = 91.5 bits (100), Expect = 3e-14
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 27664 AACCCTGCGATACGCCGCTGCGAGCTGATGACCCGCATCCGTGGGTTTGAAAATATCTGC 27723
|||||||| || || || || ||||| | | || || || ||||||||||||||
Sbjct 2892 AACCCTGCCATTCGTCGTACTGAAATGATGGTCAGAATTCGCGGCTTTGAAAATATCTGT 2833
Query 27724 AATGAACTCGGATACGTCGGGGAGTTTTACACCCTGACCGCACCGTCTAAATATCATGCC 27783
||||| || || || | | || |||||||| | || || || |||||||||||||||
Sbjct 2832 AATGAGCTTGGCTATATTGCAGAATTTTACACATTAACAGCCCCATCTAAATATCATGCC 2773
Query 27784 ACGACTAAAGCGGGATACCGTAACAGCAAATGGAACGGCGCCAGCCCGTCGGACACGCAG 27843
|| || | | || ||||||| |||| ||||| ||| ||| || | || || |||
Sbjct 2772 ACTACCATACACGGTCACCGTAATCGCAAGTGGAATGGCAGCAGTCCAGCCGATACACAG 2713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97542463150096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |