Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq199907 199 1e-46 seq206458 102 3e-17 >seq199907 Length=6585 Score = 199 bits (220), Expect = 1e-46 Identities = 296/420 (70%), Gaps = 0/420 (0%) Strand=Plus/Minus Query 7977 TCGCCTGAGTATGCAATGCTGCCTGCAGGCACGCTAACCAAATGGGGGAAACCCGGCGAC 8036 ||||| || || || ||||| || ||||| || | |||||||| ||| || || Sbjct 4674 TCGCCAGAATACGCCATGCTTCCCGCAGGGACCATCGTTAAATGGGGTAAAGTGGGTGAT 4615 Query 8037 GCGCTGGCGGCGCTGAAGCCGCTTGATAACTGTAAAGCGTTGGGTGCGATGGGCCAGACC 8096 | | | |||||||||| || ||||||||||| | ||||| | || | || Sbjct 4614 TTACCAACTGTTTTGAAGCCGCTAGAAAACTGTAAAGCCATTGGTGCCACAGGTCTAACG 4555 Query 8097 GGTGGGTTCGTTGACTGCACCACGCTGAAGGATAAGCAAAAGCAGTCAATCAGTGATCTG 8156 ||| | || || || ||||||||||| |||||||| | ||||||| || |||| || Sbjct 4554 GGTAGCTTTGTGGATTGCACCACGCTAAAGGATAAAAATAAGCAGTTTATTTCTGATATG 4495 Query 8157 CCGGATGGCCCGGAAAAGTCGCTGGGGTTCATTGACGATCCTGCGAATGCGAGCTTTACG 8216 || || || || ||||| | ||||| || || || ||||||| ||||| ||| || Sbjct 4494 CCAGAAGGACCTGAAAAAACACTGGGATTTATCGATGATCCTGAAAATGCAGATTTTGCG 4435 Query 8217 GCGTTACTTAATGCGGCAGAGGCTCGCGAGACCATTCAGCTTTATGTTGAGCTGCCGAAC 8276 || || | ||||||||| |||| || || || | ||| | | |||| || || || Sbjct 4434 GCTTTTTTGAATGCGGCACAGGCGCGTGAAACGGTGCAGTTCTTCATTGAACTTCCAAAT 4375 Query 8277 AAACGTACCGCAACAATGCTGCTGGCGTTGTCTGGCTGGCAGATGAATGAAATCACCGCG 8336 ||||||||||| |||||| | | || || || || ||| | ||| || || | ||| Sbjct 4374 AAACGTACCGCGACAATGATCTTAGCATTATCAGGTTGGGAAATGGCAGACATTAGTGCG 4315 Query 8337 CCAGCGAGTGAAGTGATTCAGATCACCGTACAAGGTAAGCAAAACAGCATTAAGTGGGGT 8396 ||||| |||||||| || |||||| | || ||||||||||||||| | | | |||||| Sbjct 4314 CCAGCAAGTGAAGTTATCCAGATCTCAGTCAAAGGTAAGCAAAACAACCTGACTTGGGGT 4255 >seq206458 Length=3100 Score = 102 bits (112), Expect = 3e-17 Identities = 148/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 49562 CAGTCCGGGAAAAGCCGACAGGAACGCGGATACGGTCGGCCCTGGGAAATCATTCGCGCC 49621 ||| |||| || |||||||| || || || |||||| ||||| | || || | Sbjct 2342 CAGCCCGGCAAGAGCCGACATGAGCGAGGTTACGGTTCTAAGTGGGATAAGATACGACCT 2401 Query 49622 CGCATCCTCCAGCGTGACAAATACCTTTGCCAGAACTGCCGACGCCAAGGTATCGCCGCA 49681 || ||||| |||||||| ||||| ||||| || |||||| || | || || | | Sbjct 2402 CGAATCCTTCAGCGTGATAAATATCTTTGTCAAAACTGCTTACCTC--GG----GCTGTA 2455 Query 49682 AAAGCTACCAGCGTCGACCACATCATTCCCAAAGCCCACGGCGGTACTGATGACGATTCC 49741 |||| | | |||||||||||||| || ||||| || || ||||||||||| ||| Sbjct 2456 GAAGCCAAGACTGTCGACCACATCATACCTAAAGCACATGGTGGTACTGATGATGATGGT 2515 Query 49742 AATCTGGAATCGTTGTGCTGGCCGTGCC 49769 || || |||| | |||||||| |||| Sbjct 2516 AACTTGCAATCACTCTGCTGGCCTTGCC 2543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164376169272776