Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_005859.1
Length=121750
Score E
Sequences producing significant alignments: (Bits) Value
seq57119 122 7e-23
seq21034 82.4 6e-11
>seq57119
Length=3586
Score = 122 bits (134), Expect = 7e-23
Identities = 442/695 (64%), Gaps = 45/695 (6%)
Strand=Plus/Minus
Query 39798 TTACGCATATCCATAATCATCTGGCCATCGTAACCAGTGCCAACTACTGTTTGCGGTACA 39857
|||||||||||||||||||| | |||||| || | | ||||| || | | || ||
Sbjct 2580 TTACGCATATCCATAATCATTTTGCCATCATAGTCTGCACCAACCACAATATTAGGCACC 2521
Query 39858 CCACCTTGATATTTCTGAGCACGAATCATTTCAACTTCTAGTTGTTTCCAGCGAATCATC 39917
|||||| |||||| ||||| ||| ||||| |||| |||||||| |||||
Sbjct 2520 TCACCTTTATATTTGTGAGCTTTAATTTGTTCAATCTCTAACTGTTTCCAATTGATCATT 2461
Query 39918 TCAGGAGTAATAGTACGTTGCAGAGCGGCGTTAGCTTCGGCTTCTTTGTTAGCTGCGTAC 39977
||| | |||||||||||||| | || |||||||| |||||||| | || || |||
Sbjct 2460 TCACGGGTAATAGTACGTTGTAATATCGCATTAGCTTCAGCTTCTTTCTGTGCAGCATAC 2401
Query 39978 AGTTTAGCATC---------------------------------TGCATCACGTTCGTTT 40004
| ||| ||||| ||||| |||||| |
Sbjct 2400 AATTTTGCATCCGCTTCTTGGCGCATCGCAAATGAACTTGCTTGTGCATTACGTTCTCTA 2341
Query 40005 GCAATAGCCTGGTTGTT-ACGAGCTTCACGATCTGCTTCTGCTTGTTTAACCTTCTGCTG 40063
|| || | || |||||| | || || | || ||||| || |||||| | |||
Sbjct 2340 GCGAT-GGCTTGTTGTTCAGCAGACTCTCTTTCCGCTTCAGCAATAACAACCTTTTTCTG 2282
Query 40064 TGC---TTCTTGTTCAACACGAGCCAATTCAGCTTTCGCAGCATTAACTTGTTCTTCACG 40120
|| ||| | || ||| || ||||| || |||| ||| |||| ||
Sbjct 2281 AGCTAATTCACGCTCTTTTTCTGCC---TCTGCTTTTGCTTGGTTAATTTGCTCTTGGCG 2225
Query 40121 AACTTTGGTATTCTGTACCTGTTCCATGATTACAGGCGGCAAAGTAATATCCTGAAGGAA 40180
| ||| ||||| || || || | || |||||||||||||| || | |
Sbjct 2224 CATTTTAGTATTAACCACTTGCTCTTGTACAACTTCAGGCAAAGTAATATCTTGGATCAT 2165
Query 40181 CACTTGCTTAACTGTGTAACCATAAGGGCGTGCGTACTCTTCAACTTCCTGCTGAATTGC 40240
| || || | ||| || ||||||||| ||| ||| ||| || | | |||| |
Sbjct 2164 AATTTCTTTTATTGTATAGCCATAAGGGGATGCATACCCTTGAATAGCATCACGAATAGA 2105
Query 40241 AGTTTGCAATTGTGCTTGAATTTTAGCATCAAACAAATCTTGTGCTTTAGGTACAGACTT 40300
||| |||| | ||| | | || | | | |||||| || |||| ||| ||
Sbjct 2104 TTCTTGTAATTTTCTTTGTGTATCTGCTGTATAAAGATCTTGCGCATTAGCAACATCTTT 2045
Query 40301 ACCAAACTCACGAATAGTAGATAGTAATTTCTCAGTTACATACTTATCTAGAGCCTGATC 40360
|||||| || ||| || || | ||||| | |||||| ||||||| ||| | |
Sbjct 2044 ACCAAATTCCAAAATCGTTGAAATCAATTTTTGGCGTACATATTTATCTAAAGCTTCACT 1985
Query 40361 CTGAGTACCTGCGTTAATACGGTTAAT--CGGTGCCTTAGAACCATCAAACTGCAACATA 40418
| ||||| | |||||||| |||| ||| || ||||||||||||||||| | |||
Sbjct 1984 TTCTGTACCACCATTAATACG--TAATACCGGAGCTTTAGAACCATCAAACTGAAGCATT 1927
Query 40419 ACAGTCAGGTCAACAGTGGATTTAAACTTATCCTG 40453
|| || | |||||| | ||||| | ||||| ||
Sbjct 1926 ACCGTAATATCAACAATAGATTTTAGTTTATCTTG 1892
>seq21034
Length=11989
Score = 82.4 bits (90), Expect = 6e-11
Identities = 82/104 (79%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 27655 ATTACATCGC-CTGAGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGT 27713
||||||| | ||| || || |||||| |||||||||| | ||| ||||| ||||||
Sbjct 3725 ATTACATTGTACTG-GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGT 3667
Query 27714 GCGTTAAAACGCACAGCGTACCCTGAAACACGGATAGTTAATTG 27757
| ||| ||||| ||||| || ||||| ||||||||||| | |||
Sbjct 3666 GAGTTGAAACGTACAGCATAACCTGATACACGGATAGTCAGTTG 3623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 387960063090116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |