Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq57119 122 7e-23 seq21034 82.4 6e-11 >seq57119 Length=3586 Score = 122 bits (134), Expect = 7e-23 Identities = 442/695 (64%), Gaps = 45/695 (6%) Strand=Plus/Minus Query 39798 TTACGCATATCCATAATCATCTGGCCATCGTAACCAGTGCCAACTACTGTTTGCGGTACA 39857 |||||||||||||||||||| | |||||| || | | ||||| || | | || || Sbjct 2580 TTACGCATATCCATAATCATTTTGCCATCATAGTCTGCACCAACCACAATATTAGGCACC 2521 Query 39858 CCACCTTGATATTTCTGAGCACGAATCATTTCAACTTCTAGTTGTTTCCAGCGAATCATC 39917 |||||| |||||| ||||| ||| ||||| |||| |||||||| ||||| Sbjct 2520 TCACCTTTATATTTGTGAGCTTTAATTTGTTCAATCTCTAACTGTTTCCAATTGATCATT 2461 Query 39918 TCAGGAGTAATAGTACGTTGCAGAGCGGCGTTAGCTTCGGCTTCTTTGTTAGCTGCGTAC 39977 ||| | |||||||||||||| | || |||||||| |||||||| | || || ||| Sbjct 2460 TCACGGGTAATAGTACGTTGTAATATCGCATTAGCTTCAGCTTCTTTCTGTGCAGCATAC 2401 Query 39978 AGTTTAGCATC---------------------------------TGCATCACGTTCGTTT 40004 | ||| ||||| ||||| |||||| | Sbjct 2400 AATTTTGCATCCGCTTCTTGGCGCATCGCAAATGAACTTGCTTGTGCATTACGTTCTCTA 2341 Query 40005 GCAATAGCCTGGTTGTT-ACGAGCTTCACGATCTGCTTCTGCTTGTTTAACCTTCTGCTG 40063 || || | || |||||| | || || | || ||||| || |||||| | ||| Sbjct 2340 GCGAT-GGCTTGTTGTTCAGCAGACTCTCTTTCCGCTTCAGCAATAACAACCTTTTTCTG 2282 Query 40064 TGC---TTCTTGTTCAACACGAGCCAATTCAGCTTTCGCAGCATTAACTTGTTCTTCACG 40120 || ||| | || ||| || ||||| || |||| ||| |||| || Sbjct 2281 AGCTAATTCACGCTCTTTTTCTGCC---TCTGCTTTTGCTTGGTTAATTTGCTCTTGGCG 2225 Query 40121 AACTTTGGTATTCTGTACCTGTTCCATGATTACAGGCGGCAAAGTAATATCCTGAAGGAA 40180 | ||| ||||| || || || | || |||||||||||||| || | | Sbjct 2224 CATTTTAGTATTAACCACTTGCTCTTGTACAACTTCAGGCAAAGTAATATCTTGGATCAT 2165 Query 40181 CACTTGCTTAACTGTGTAACCATAAGGGCGTGCGTACTCTTCAACTTCCTGCTGAATTGC 40240 | || || | ||| || ||||||||| ||| ||| ||| || | | |||| | Sbjct 2164 AATTTCTTTTATTGTATAGCCATAAGGGGATGCATACCCTTGAATAGCATCACGAATAGA 2105 Query 40241 AGTTTGCAATTGTGCTTGAATTTTAGCATCAAACAAATCTTGTGCTTTAGGTACAGACTT 40300 ||| |||| | ||| | | || | | | |||||| || |||| ||| || Sbjct 2104 TTCTTGTAATTTTCTTTGTGTATCTGCTGTATAAAGATCTTGCGCATTAGCAACATCTTT 2045 Query 40301 ACCAAACTCACGAATAGTAGATAGTAATTTCTCAGTTACATACTTATCTAGAGCCTGATC 40360 |||||| || ||| || || | ||||| | |||||| ||||||| ||| | | Sbjct 2044 ACCAAATTCCAAAATCGTTGAAATCAATTTTTGGCGTACATATTTATCTAAAGCTTCACT 1985 Query 40361 CTGAGTACCTGCGTTAATACGGTTAAT--CGGTGCCTTAGAACCATCAAACTGCAACATA 40418 | ||||| | |||||||| |||| ||| || ||||||||||||||||| | ||| Sbjct 1984 TTCTGTACCACCATTAATACG--TAATACCGGAGCTTTAGAACCATCAAACTGAAGCATT 1927 Query 40419 ACAGTCAGGTCAACAGTGGATTTAAACTTATCCTG 40453 || || | |||||| | ||||| | ||||| || Sbjct 1926 ACCGTAATATCAACAATAGATTTTAGTTTATCTTG 1892 >seq21034 Length=11989 Score = 82.4 bits (90), Expect = 6e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 27655 ATTACATCGC-CTGAGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGT 27713 ||||||| | ||| || || |||||| |||||||||| | ||| ||||| |||||| Sbjct 3725 ATTACATTGTACTG-GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGT 3667 Query 27714 GCGTTAAAACGCACAGCGTACCCTGAAACACGGATAGTTAATTG 27757 | ||| ||||| ||||| || ||||| ||||||||||| | ||| Sbjct 3666 GAGTTGAAACGTACAGCATAACCTGATACACGGATAGTCAGTTG 3623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 387960063090116