Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq274661 129 1e-25 seq247153 129 1e-25 seq8776 102 2e-17 seq128835 96.9 7e-16 seq102198 84.2 4e-12 >seq274661 Length=1303 Score = 129 bits (142), Expect = 1e-25 Identities = 233/341 (68%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 5376 CTGAATGTTGAATACAGATTTATCTTGTGCTGCTTCATCAGATCTTTGAATTCTTTGTTG 5435 ||| | || || || |||| |||| | | |||||||| | ||| || ||| || Sbjct 98 CTGTAGGTAGAGTAGTGATTGATCTCGAATTTCTTCATCAATTGTTTAAACGTTTTATTA 157 Query 5436 TAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGATACGACCTTGCTGAAGTACA 5495 |||| ||||| || | ||| || | ||| | || | ||| ||| | || | Sbjct 158 AAAAATTCTTTGCCATCATCTGTCTGCAAATTTCTTGGTACACGTTTTTGGTTTAGAATT 217 Query 5496 GACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGGAACTGCCCAGGCA 5555 | || |||||| |||| || || | || |||||| || ||||| ||||||||||| Sbjct 218 GTCTCCATAGCTCTTGCCACTTCGCCCCCGCTTTTATTTTTGATTGGCGCTGCCCAGGCA 277 Query 5556 TATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTTATTGACTGTTGCA 5615 |||| |||||| | || |||| |||||| ||| | ||| |||||| ||| | | | Sbjct 278 AATTTCGAAAATGTGTCGATGACTGTAAGGAGAAATTTGAATCCTTGGTTGTCACTCAAA 337 Query 5616 TATGGAATCATCTCAACCAAGTCAGCTTGCCAAGTCTCATCGAGACCTCGGATATCAACA 5675 ||| | |||| |||||||| || || ||||| ||||| | |||| |||| | ||| Sbjct 338 AATGCACTCATATCAACCAAATCTGCCTGCCATAAGTCATCTATACCTTTGATAACGACA 397 Query 5676 TGACGACGTTTATAGTTTCTACGAGCTGGTTTGTGAAGCTC 5716 |||||| || | ||||| ||||| ||||| || | ||| Sbjct 398 CCTCGACGTCTAAAATTTCTGCGAGCCGGTTTATGTAACTC 438 >seq247153 Length=1215 Score = 129 bits (142), Expect = 1e-25 Identities = 233/341 (68%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 5376 CTGAATGTTGAATACAGATTTATCTTGTGCTGCTTCATCAGATCTTTGAATTCTTTGTTG 5435 ||| | || || || |||| |||| | | |||||||| | ||| || ||| || Sbjct 119 CTGTAGGTAGAGTAGTGATTGATCTCGAATTTCTTCATCAATTGTTTAAACGTTTTATTA 178 Query 5436 TAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGATACGACCTTGCTGAAGTACA 5495 |||| ||||| || | ||| || | ||| | || | ||| ||| | || | Sbjct 179 AAAAATTCTTTGCCATCATCTGTCTGCAAATTTCTTGGTACACGTTTTTGGTTTAGAATT 238 Query 5496 GACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGGAACTGCCCAGGCA 5555 | || |||||| |||| || || | || |||||| || ||||| ||||||||||| Sbjct 239 GTCTCCATAGCTCTTGCCACTTCGCCCCCGCTTTTATTTTTGATTGGCGCTGCCCAGGCA 298 Query 5556 TATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTTATTGACTGTTGCA 5615 |||| |||||| | || |||| |||||| ||| | ||| |||||| ||| | | | Sbjct 299 AATTTCGAAAATGTGTCGATGACTGTAAGGAGAAATTTGAATCCTTGGTTGTCACTCAAA 358 Query 5616 TATGGAATCATCTCAACCAAGTCAGCTTGCCAAGTCTCATCGAGACCTCGGATATCAACA 5675 ||| | |||| |||||||| || || ||||| ||||| | |||| |||| | ||| Sbjct 359 AATGCACTCATATCAACCAAATCTGCCTGCCATAAGTCATCTATACCTTTGATAACGACA 418 Query 5676 TGACGACGTTTATAGTTTCTACGAGCTGGTTTGTGAAGCTC 5716 |||||| || | ||||| ||||| ||||| || | ||| Sbjct 419 CCTCGACGTCTAAAATTTCTGCGAGCCGGTTTATGTAACTC 459 >seq8776 Length=3934 Score = 102 bits (112), Expect = 2e-17 Identities = 197/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 5376 CTGAATGTTGAATACAGATTTATCTTGTGCTGCTTCATCAGATCTTTGAATTCTTTGTTG 5435 ||| | || || || |||| |||| | | |||||||| | ||| || ||| || Sbjct 144 CTGTAGGTAGAGTAGTGATTGATCTCGAATTTCTTCATCAATTGTTTAAACGTTTTATTA 203 Query 5436 TAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGATACGACCTTGCTGAAGTACA 5495 |||| ||||| || | ||| || | ||| | || | ||| ||| | || | Sbjct 204 AAAAATTCTTTGCCATCATCTGTCTGCAAATTTCTTGGTACACGTTTTTGGTTTAGAATT 263 Query 5496 GACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGGAACTGCCCAGGCA 5555 | || |||||| |||| || || | || |||||| || ||||| ||||||||||| Sbjct 264 GTCTCCATAGCTCTTGCCACTTCGCCCCCGCTTTTATTTTTGATTGGCGCTGCCCAGGCA 323 Query 5556 TATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTTATTGACTGTTGCA 5615 |||| |||||| | || |||| |||||| ||| | ||| |||||| ||| | | | Sbjct 324 AATTTCGAAAATGTGTCGATGACTGTAAGGAGAAATTTGAATCCTTGGTTGTCACTCAAA 383 Query 5616 TATGGAATCATCTCAACCAAGTCAGCTTGCCAAGTCTCATCGAGACCTCGG 5666 ||| | |||| |||||||| || || ||||| ||||| | ||| ||| Sbjct 384 AATGCACTCATATCAACCAAATCTGCCTGCCATAAGTCATCTATACCCCGG 434 >seq128835 Length=4866 Score = 96.9 bits (106), Expect = 7e-16 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 4342 GGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAGAT 4401 ||||||||||| |||||||||| | ||| | | | || | | |||||||||| || Sbjct 2433 GGCTACATCCTCAAAGTAGATCTGGAATATACAAAAGAATTCCCTAATCTACACAAGTAT 2492 Query 4402 CTACCTTTATGCCCAGAACATTTTGTACCACCTGGTAGCA-AGCAACAAAAACTCACGAC 4460 || | ||| |||||||||| ||| |||||||| | || | || |||||| ||| Sbjct 2493 CTTCGTTTCTGCCCAGAACGCGATGTTCCACCTGG-ATCAGAAGAAGGAAAACTATTGAC 2551 Query 4461 AACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAA 4512 ||| || | || ||| ||| ||||||||||| || ||||||||||||| Sbjct 2552 TACTTTGAAAGACAAAGTTAAATATGTTATTCATTACCGAAATTTGAAACAA 2603 >seq102198 Length=3686 Score = 84.2 bits (92), Expect = 4e-12 Identities = 122/171 (71%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 4342 GGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAGAT 4401 ||||| ||||||||||||||||| | |||| | || || ||| ||| |||||| || Sbjct 389 GGCTATATCCTTGAAGTAGATCTGAAACATCCAAAAAAATTGCATAATCAACACAAGTAT 448 Query 4402 CTACCTTTATGCCCAGAACATTTTGTACCACCTGGTAGCAAGCAACAAAAACTCACGACA 4461 || ||||| |||||||||| ||| || || || || || ||||||| || | Sbjct 449 CTCCCTTTCTGCCCAGAACGCGATGTTCCTCCCGGATCAAAAGAAGAAAAACT-ACTGCT 507 Query 4462 ACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAA 4512 ||| || | || ||| ||| ||| |||||| || || ||||||||| Sbjct 508 ACTTTGAAAGACAAAGTTAAATATAATATTCATTACTGGAACTTGAAACAA 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97603032690584