Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq311087 109 9e-19 seq110923 98.7 2e-15 >seq311087 Length=3001 Score = 109 bits (120), Expect = 9e-19 Identities = 160/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 |||||| ||||||||||| ||||| || || |||| || | ||||| || || ||||| Sbjct 614 TGGTATCCTCTTCAATCATGAATCACCCCGACGAGGCGAAAATTTTGTCACACGCAAGAT 673 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCT 194065 ||||| | | | || ||| | || || || | ||| |||| | || Sbjct 674 TACACGATCAGTGGCCAAAATCGAACTAGGCCAACTTGAG-TGCTTCGAGTTGGGCAACT 732 Query 194066 TAA-TGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGT 194124 | | | || | |||||||| ||||||||||| |||||||||||||||||| | ||| Sbjct 733 TGTCTTCGAAACGTGATTGGGGTCACGCAAAGGACTATGTTGAAGCGATGTGGCTGATGC 792 Query 194125 TGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | ||||||||| ||||||| || | ||| || || || |||||| Sbjct 793 TTCAACAGGATAAACCCGAAGACTTTGTTATAGCAACTGGTGAA 836 >seq110923 Length=19069 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 156917 ATGATATTGGATTGATTGATATTGTTGCAGTAAACTTATATCCTTTCGCAGAAACAGTTG 156976 ||| ||||| | ||||||||| || | || || ||||||| || || |||| || | Sbjct 18073 ATGGTATTGCACCGATTGATATGGTCGTTGTTAATCTATATCCATTTGCCCAAACCGTGG 18014 Query 156977 CTAAACCAGATGTAACTCTTGCAGATGCAATAGAGAATATTGATATTGGTGGTCCTAGTA 157036 | |||||| || || |||| |||||| |||||||||||||||| || || || | | Sbjct 18013 CAAAACCAAATTGTACCCTTGAAGATGCTGTAGAGAATATTGATATCGGCGGCCCAACCA 17954 Query 157037 TGGTGAGATCAGCAGCAAAGAATTATAAGGATGTTGC 157073 ||||| | || || || |||||| |||| || || || Sbjct 17953 TGGTGCGCTCCGCGGCTAAGAATCATAAAGACGTAGC 17917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 804333095129760