Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq21991 134 2e-26 seq216702 82.4 9e-11 >seq21991 Length=9696 Score = 134 bits (148), Expect = 2e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 41905 GCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGC 41964 || || ||||| ||| | ||||| || || ||||| || || ||||| || | |||||| Sbjct 6002 GCAATTGTGAAATATGTCTCACAGCGTGCAGGTATTGGGGTAAATGCAGGCCGCATTCGT 6061 Query 41965 GCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGG 42024 ||| | || ||| |||||||||||||| | || || || || ||||||| Sbjct 6062 GCATTAGGCAGCCCAATTCGTGGTGGTGAAGCGTTCCACACTGGTTGTATTCCGTTCTAT 6121 Query 42025 AAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCA 42084 ||||| | || || ||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 6122 AAACACTTCCAAACTGCGGTGAAATCTTGTTCGCAAGGTGGCGTTCGTGGTGGTGCTGCA 6181 Query 42085 ACGTTGT 42091 || |||| Sbjct 6182 ACCTTGT 6188 Score = 104 bits (114), Expect = 3e-17 Identities = 214/318 (67%), Gaps = 14/318 (4%) Strand=Plus/Plus Query 43546 GTTGCCCGATATGAAGAACAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTG 43605 || || || ||||| | ||||| | | | || |||| ||| |||||||||| || Sbjct 8219 GTGGCGCGCTATGATCAGCAAAAGTACCCTATTTTTGAAAAGCTGATTGAAAAACAATTG 8278 Query 43606 TCATTCTTCTGGCGACCGGAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAA 43665 || || |||||||| || |||||||| || | || ||||||||| | ||| Sbjct 8279 TCGTTTTTCTGGCGCCCTGAAGAAGTTGACGTATCTCGCGACCGTATTGACTATAATGCG 8338 Query 43666 ATGCCGGAACACGAGAAAATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGAT 43725 |||| || ||||| ||| |||||| ||| ||| |||| ||||| ||| | || Sbjct 8339 TTGCCAGATCACGAAAAACATATTTTTATCAGTAATCTGAAATACCAAACGCTGCTGGAC 8398 Query 43726 ACCATTCAGGGACGTGGCCCTAACCTGGCGTTTCTCCCGATTGCCTCTGATGT---TTC- 43781 | |||||||| || ||||||| |||| || |||||| ||||| | ||| Sbjct 8399 TCTATTCAGGGCCGCAGCCCTAATGTGGCATT-------ATTGCCGCTGATTTCGATTCC 8451 Query 43782 ---AATGGAAACGTGGATCGAAACATGGGCTTTCAGTGAAACAATTCATAGCCGCAGTTA 43838 | ||||||| ||| | ||||| ||||| || |||||| || || || || Sbjct 8452 TGAACTGGAAACTTGGGTTGAAACGTGGGCGTTTTCTGAAACTATCCACTCACGTTCATA 8511 Query 43839 TACACACATTCAGCGTAA 43856 |||||||||| ||||| Sbjct 8512 TACACACATTATTCGTAA 8529 >seq216702 Length=10464 Score = 82.4 bits (90), Expect = 9e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 156174 ACTGAAAAAGATGTGTT-TGATGCTTTCCAATCGTATGAATACGAAGTTAACACGCTGCA 156232 || || ||||| ||||| ||| || || ||||| | || || |||||||| || || || Sbjct 1777 ACCGATAAAGA-GTGTTATGACGCCTTTCAATCTTTAGAGTATGAAGTTAATACACTTCA 1719 Query 156233 TACTGCCAACGGACAAACACCTTTCGTTACTATTACTTTCGGTACTGGTACGGGAATGTT 156292 ||||| || || ||||| || || ||||| || ||| || ||| || | Sbjct 1718 CACTGCGAATGGCCAAACCCCATTTGTTACCTTTGGTTTTGGCCTTGGAACCTCTAAAGA 1659 Query 156293 TGAACGGATGATCCAGAAAGCTATTCTGAAAAACCGTATCCGTGGCCTGGGTAAAAAAGG 156352 | ||| | || ||| || |||||||||||||||| || ||||| || ||||| | Sbjct 1658 AGCACGATTAATTCAGCAATCTATTCTGAAAAACCGCATTGCGGGCCTTGGCAAAAATCG 1599 Query 156353 TATTACTCCGGTATTCCCTAAACTGGT 156379 || || |||| |||||||| || || Sbjct 1598 TAAAACGGCGGTTTTCCCTAAGCTCGT 1572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575167915593600