Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq105684 161 3e-34 seq160110 107 5e-18 >seq105684 Length=4320 Score = 161 bits (178), Expect = 3e-34 Identities = 369/546 (68%), Gaps = 12/546 (2%) Strand=Plus/Plus Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCA-AAAAATGTAAAAATTTG 111430 ||||| || | ||| || ||||| || ||| |||| | ||||| || | ||||| Sbjct 1561 TGGTTCATACACGGTGACACCAATGCGAAAACACT-GCAGGATAAAAACATACACATTTG 1619 Query 111431 GGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGG 111490 ||| || || | | || || ||| | || | |||| || || || ||||| Sbjct 1620 GGACGGTAACAGCACGCGAGAATTTTTGGACAAATGTGGTTTTACTGATCGTGAGGAAGG 1679 Query 111491 TGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCAT 111550 ||||| || || ||||| || ||||||||||| || ||||||| || || |||||| | Sbjct 1680 AGATCTAGGCCCTGTTTATGGGTTTCAATGGCGTCATATTGGTGCGGAGTATAAAACC-T 1738 Query 111551 GCA----CGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAA 111606 ||| ||||| | | | || ||||| ||||||| | | | || ||| | || Sbjct 1739 GCAAAGACGACT-ACACGGGCCA--GGGAATTGATCAACTGAATGAGGTGATTACTAGAA 1795 Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGG 111666 | |||| ||||||| | || || ||||| |||| || ||||| || | | | Sbjct 1796 TCAAGACGAACCCAAATGACCGGCGTATTATCATGACCGCCTGGAATCCGATAGACATCC 1855 Query 111667 AAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726 ||||||||||||||||| |||||| | | |||||| || || | ||| || Sbjct 1856 CTAAAATGGCACTTCCACCCTGTCATTGTCTCGTCCAGTTCTACGTTGCGAATGGGGAGC 1915 Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786 ||||||| || |||||||| | || || ||||| || || || || || || ||||| | Sbjct 1916 TTTCATGTCAGATGTATCAAAGGTCGGCAGATATGGGGCTGGGAGTGCCTTTCAATATCG 1975 Query 111787 CAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAAT 111846 | ||||| ||| | || |||| | | || || ||| |||| | ||||| || || | Sbjct 1976 CGAGTTATGCATTGCTGACTTACATGATTGCCCATGTTACCGGATTGAAACCTGGCGACT 2035 Query 111847 TCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACA- 111905 | ||||| | || || || |||||||| ||| ||| |||| || |||||| | Sbjct 2036 TTGTTCACACACTTGGCGACGCTCATGTTTATTTAAATCACGTTGA-GCCGTTAAAAGAG 2094 Query 111906 CAGTTG 111911 |||||| Sbjct 2095 CAGTTG 2100 >seq160110 Length=3910 Score = 107 bits (118), Expect = 5e-18 Identities = 203/291 (70%), Gaps = 16/291 (5%) Strand=Plus/Minus Query 22433 TTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGT---TCATTCGCGG 22489 |||| || |||||||||||||| | |||||| || || | |||| || | Sbjct 2639 TTAAAAAAAAGGCAGATTGGGCTTTAGCATGGATTTCCAGCAAATCTGCAACATTTGCAG 2580 Query 22490 AACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA-TTTTG-TGC 22547 | || ||||||| ||||||| |||||||| || | ||||| | ||| ||||| || Sbjct 2579 AGCGGATTATTGCGTTTGCTGCAGTTGAAGGGATAT--TTTTCAGCGGCAGTTTTGCAGC 2522 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 ||| |||||||| |||||||| | |||||||| ||| | || || || || || ||||| Sbjct 2521 AATATTTTGGCTCAAAAAACGAGGTATTATGCCTGGTTTGACATTCTCTAACGAATTAAT 2462 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG---TATGCTATATCGGAATCATAT 22664 |||||||| || || ||| |||||||| || |||| |||| ||| || | Sbjct 2461 CTCACGAGATGAAGGGCTCCATTGTGATTTTGCCTGCCTTATG-TATA----AAT-ATTT 2408 Query 22665 CATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGT 22715 |||| || | | || |||||| || |||| || ||| | | ||||| Sbjct 2407 AGTTCAGAAGCCTTCAAATGAAAGAGTGATTGAAATAATTTCCGAAGCAGT 2357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1298023276411272