Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq160110 235 6e-57 seq83382 123 3e-23 seq202764 82.4 8e-11 >seq160110 Length=3910 Score = 235 bits (260), Expect = 6e-57 Identities = 307/425 (72%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 92909 AACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTC 92968 || || | ||| | ||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct 2243 AATTCATTCAAGAGTCTATCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTC 2302 Query 92969 ATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCT 93028 || || | | || |||| ||||| ||||| || || | ||||| || ||| Sbjct 2303 ATGCCAATCATCGCCACTGGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCT 2362 Query 93029 TCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATT 93088 || | ||||| || ||||| ||||| || || || || | ||| || ||||| Sbjct 2363 TCGGAAATTATTTCAATCACTCTTTCATTTGAAGGCTTCTGAACTAAATATTTATACATA 2422 Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 | ||| ||||| || ||| | ||||| |||||||| || || || || |||||| Sbjct 2423 AGGCAGGCAAAATCACAATGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTC 2482 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 ||||| || | | |||||||| |||||||||||||||| |||||||| || ||| Sbjct 2483 AAACCAGGCATAATACCTCGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAA 2542 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 ||||| ||||| || || ||||| || | ||| || || ||||| |||| || || ||| Sbjct 2543 AATATCCCTTCAACTGCAGCAAACGCAATAATCCGCTCTGCAAATGTTGCAGATTTGCTG 2602 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 |||||| |||||||||||| || ||||| |||| |||||| | ||||| || || Sbjct 2603 GAAATCCATGCTAAAGCCCAATCTGCCTTTTTTTTAACACAAGGCAACGTTTCAATTGCA 2662 Query 93329 TTAAA 93333 || || Sbjct 2663 TTGAA 2667 Score = 140 bits (154), Expect = 4e-28 Identities = 187/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424 ||||||||||| || | |||||||| ||||| || || |||||||||||||| ||| Sbjct 2759 TATGTATCGATCAAAATGCTGTACATTTCGGAATGCACGTTTTCCATTGCAATTTGAAAT 2818 Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTT 93484 || || || || | || || |||| ||||| || ||| |||| || || |||||| Sbjct 2819 CCATAAAAGCAACGTGCCTCAGTGACTTGCACCTCCTGACTGAATCGTTCCACAAGATTT 2878 Query 93485 TCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTC 93544 || || || || || || |||||||| || || || |||| ||| | |||||| Sbjct 2879 TCGTTTACAATCCCGTCAGATGCTGCGAAGAACGCTAATACATGAGAAACAAAATGGCGT 2938 Query 93545 TCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACA 93604 ||| | | | || || | |||||| | ||| || |||||||| || || || ||| Sbjct 2939 TCACTAGATGTGAGGTTGTTCCAATCATCCATATCCTTCGAAAGATCCACCTCCTCAACA 2998 Query 93605 GTCCAAAACGATGCTTCTGC 93624 |||||||| |||||||| || Sbjct 2999 GTCCAAAATGATGCTTCGGC 3018 Score = 98.7 bits (108), Expect = 1e-15 Identities = 115/154 (75%), Gaps = 5/154 (3%) Strand=Plus/Plus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801 ||| || |||||||| | || ||||| ||||| |||| | |||||| || || Sbjct 2024 TTAAAAGTCTGCATCCATAGTGAATACGTTGTCTTTAGGATC---AGACATAACTCCCCA 2080 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||||||||||| |||||||| ||||| ||||||||||| || |||||||||||||| | Sbjct 2081 CTTTTGGTATTCTCCAACTTTCTTTTCGAAGAAATTTGTTTTGCCTTCCAAAGATATTAA 2140 Query 92862 ATTCACTA--GTGATTGGATTCTTGGCGTTATAA 92893 | || | | || ||||||| || ||| ||| Sbjct 2141 CTCCATAAATGGGAATGGATTCGGGGTGTTGTAA 2174 >seq83382 Length=3149 Score = 123 bits (136), Expect = 3e-23 Identities = 79/85 (93%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 1544 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAAAGGGAGC 1603 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 1604 GTGGGTTCGAACCCCACACCTGACA 1628 >seq202764 Length=2073 Score = 82.4 bits (90), Expect = 8e-11 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC 126314 |||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 1320 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCC 1369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554638953251040