Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq220453 125 6e-24 seq157614 93.3 4e-14 >seq220453 Length=1779 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || || || ||||||| || |||||||| ||||| ||| ||| | Sbjct 802 ATGCAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCC 743 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || || ||||| ||||| ||||| ||||| ||||| Sbjct 742 GATACTATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGATCAG 683 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| || |||||| | |||||| ||| || |||| || || Sbjct 682 CAGCGTCTCATTTTTGCCGGAAAACAACTAGAAGATGGGCGCACTTTGTCCGACTACAAC 623 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || || ||||| |||||||| ||||||||||| || ||||||| Sbjct 622 ATTCAGAAGGAGTCTACTCTACATTTGGTGTTGCGTCTCCGTGGTGGCA 574 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| |||||||| | ||||| || || || || ||||| || || Sbjct 1259 AATGCAGATTTTCGTCAAAACTTTAACCGGAAAGACTATCACTTTGGAAGTCGAGCCATC 1200 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 |||| || | | | || ||| |||||| ||||| |||||| | || ||||| Sbjct 1199 CGATACTATCGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGCATCCCACCAGATCA 1140 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | ||||||| || || || |||||||||||| ||| || |||| || || Sbjct 1139 GCAACGTCTTATTTTCGCCGGTAAGCAATTGGAAGATGGGCGCACTTTGTCCGACTACAA 1080 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || || ||||| |||||||| ||||||||||| || ||||||| Sbjct 1079 CATTCAGAAGGAGTCTACTCTACATTTGGTGTTGCGTCTCCGTGGTGGCA 1030 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || || || ||||||| || |||||||| ||||| ||| ||| | Sbjct 1486 ATGCAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCC 1427 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || || ||||| ||||| ||||| | ||| ||||| Sbjct 1426 GATACTATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 1367 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| || || ||||| ||||||||| | || | ||||||| || Sbjct 1366 CAACGTCTCATTTTCGCCGGAAAACAGTTGGAAGATGGTCGTACCTTATCCGATTACAAC 1307 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || |||||||| || | ||||| ||| | ||||| || ||||| Sbjct 1306 ATTCAGAAAGAATCAACTTTGCATTTGGTGCTCCGTCTCCGTGGTGG 1260 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || || || || | || || ||||| ||||| ||||| || || | Sbjct 1030 ATGCAGATCTTCGTTAAGACCTTAACTGGAAAAACTATTACATTGGAAGTCGAGCCATCC 971 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || | | | || ||| || ||| ||||| ||||| |||| ||||| Sbjct 970 GACACTATCGAGAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGATCAG 911 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| || |||||||||||||||||| || || ||||||| ||| Sbjct 910 CAACGTCTCATTTTCGCTGGCAAACAATTGGAAGATGGACGCACCTTGTCCGATTACAAT 851 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || || || || || | ||||| || ||||| Sbjct 850 ATCCAAAAGGAATCAACTCTTCACTTGGTCCTACGTCTTCGAGGTGG 804 >seq157614 Length=1694 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || ||||| || |||| || || || ||||| ||||| ||||| | Sbjct 449 ATGCAAATCTTCGTCAAGACATTGACTGGAAAGACTATTACGTTGGAAGTAGAACCTTCC 508 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || || || || || |||||| | || ||||| Sbjct 509 GATACCATTGAAAATGTTAAGGCTAAGATCCAAGATAAGGAAGGCATCCCACCAGATCAG 568 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| || || ||||||||||||||| | || || ||||||||||| Sbjct 569 CAACGTTTGATTTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGATTATAAT 628 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111420 || || || || |||||| | |||||||| || ||| | || || || ||| || Sbjct 629 ATTCAGAAGGAGTCTACATTGCATTTAGTATTACGTTTACGAGGAGGAAATTAA 682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421394289263200