Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq21991 239 2e-58 >seq21991 Length=9696 Score = 239 bits (264), Expect = 2e-58 Identities = 307/422 (73%), Gaps = 6/422 (1%) Strand=Plus/Plus Query 51863 TACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTTTGGTCAG 51922 || || || |||||||| | |||||| ||||| | || ||||| ||||| || || || Sbjct 8150 TATACAACGTTTTCACAGAAAAAGAATGACCAAATGCTGGAGCCGATGTTTTTCGGCCAA 8209 Query 51923 AACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTTAATTGAG 51982 |||||||| || || ||||| || || |||||| || || || ||| | ||||| Sbjct 8210 CCAGTTAACGTGGCGCGCTATGATCAGCAAAAGTACCCTATTTTTGAAAAGCTGATTGAA 8269 Query 51983 AAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCGTATTGAT 52042 ||||||||||| || |||||||| || ||||| || ||||| || | ||||||||||| Sbjct 8270 AAACAATTGTCGTTTTTCTGGCGCCCTGAAGAAGTTGACGTATCTCGCGACCGTATTGAC 8329 Query 52043 TATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTATCAGATT 52102 ||| | | | || | ||||| |||| ||||| | ||||||||| || || | Sbjct 8330 TATAATGCGTTGCCAGATCACGAAAAACATATTTTTATCAGTAATCTGAAATACCAAACG 8389 Query 52103 CTTCTTGACTCAATTCAGGGACGTGGGCCCAA---CACAGTTTTGCTTCCAATCGTGAGC 52159 || || ||||| |||||||| || | || || || | |||| | || | Sbjct 8390 CTGCTGGACTCTATTCAGGGCCGCAGCCCTAATGTGGCATTATTGCCGCTGATTTCG--- 8446 Query 52160 ATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTCACGT 52219 ||||||||| |||| || ||| ||||||| ||| | || || || ||||| || |||||| Sbjct 8447 ATTCCTGAACTGGAAACTTGGGTTGAAACGTGGGCGTTTTCTGAAACTATCCACTCACGT 8506 Query 52220 TCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTATCTTTGATGAAATC 52279 || ||||| ||||| ||||||||||| || | |||||| |||||| ||||| || ||| Sbjct 8507 TCATATACACACATTATTCGTAATATAGTGAATGACCCAGCCATTATTTTTGACGATATC 8566 Query 52280 GT 52281 || Sbjct 8567 GT 8568 Score = 197 bits (218), Expect = 5e-46 Identities = 260/358 (73%), Gaps = 6/358 (2%) Strand=Plus/Plus Query 52406 CGTGAGTTGAAGAAGAAGCTGTATTTATGCCTCATGTCTATCAATGCATTGGAAGCAATT 52465 ||| | |||||||| |||||||| | ||||| ||| | ||||| | ||||| || Sbjct 8890 CGTCAATTGAAGAAACAGCTGTATCTGTGCCTAATGAGCGTTAATGCGCTCGAAGCCATC 8949 Query 52466 CGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTTCGCAGAACGTAAGTTAATGGAAGGA 52525 || |||||||| |||||||| || |||||||| || || ||||| | | ||||||||| Sbjct 8950 CGTTTCTATGTTAGCTTTGCCTGTTCATTTGCGTTTGCTGAACGCGAACTGATGGAAGGA 9009 Query 52526 AATGCCAAGATTATTCGCTTAATTGCACGAGATGAAGCACTTCATTTGACAGGAACTCAG 52585 ||||| || || || |||| ||||| |||||||| || || || || ||||| || Sbjct 9010 AATGCTAAAATCATCAAGCTAATCGCACGTGATGAAGCGCTGCACTTAACTGGAACACAA 9069 Query 52586 CACATGCTGAACCTTCTTGC-AAGTGGAAAAGATGACCCAGAAATGGGTGAAATTGCTGC 52644 |||||| |||||| | |||| || |||||||||||||||||| ||||| || || Sbjct 9070 CACATGTTGAACC-TGTTGCGCTCAGGGCAAGATGACCCAGAAATGGCCGAAATCGCGGC 9128 Query 52645 TGAATGCCGCCAAGAATGCCAGAAATTGTTCGAAGATGCTGCTCAACAAGAGAAGGATTG 52704 || | ||||| || | | ||||||| | || || | ||||| || || || Sbjct 9129 AGAGT----NCAAGAGTGTTATGACTTGTTCGTTCAAGCAGCAGAGCAAGAAAAAGAGTG 9184 Query 52705 GGCCGATTATTTGTTCAAAGATGGCTCTATGATTGGCTTAAACAAGCAAATTCTATGC 52762 ||| || || | |||| || |||||||||||||| ||||| || | ||| ||||| Sbjct 9185 GGCTGACTACCTATTCAGCGAAGGCTCTATGATTGGTTTAAATAAAGATATTTTATGC 9242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168756303411224