Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_013599.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq154968 190 5e-44 >seq154968 Length=9525 Score = 190 bits (210), Expect = 5e-44 Identities = 218/293 (74%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1872 TTCACCGCTTCCAGCAGCAGGTCCTGTACTTCGCGTTTAGATTCACGGCGGGCCATCACC 1931 |||| ||||| | ||| ||||| |||| |||||| ||||| | ||| || |||| || Sbjct 403 TTCATTGCTTCTAACAGAAGGTCTTGTATTTCGCGCTTAGAATTACGACGCTCCATTACT 462 Query 1932 AATTCATCCACCGTGCCCGCCGCCACGATGTGGTGAATAAATACAGGCCGCTGATGTCCG 1991 | || |||| || || || || | | |||||||||||||||||| || | || ||| Sbjct 463 ACCTCGTCCATAGTTCCAGCGGCAATAAGGTGGTGAATAAATACAGGTCGGTTATAACCG 522 Query 1992 GCTTGCGCCTGACGTGTCGGCCCAATGCGTTCGATGATCTGCTGGTACTGCTCCAGGTCC 2051 ||||| || || || || || || ||||||||||| || ||||| || ||||| ||| Sbjct 523 GCTTGAATTTGTCGGGTAGGGCCGATACGTTCGATGATTTGTTGGTATTGTTCCAGATCC 582 Query 2052 CACCAGTGGCCGAAGAAGGCCAAAATATTTCCGCCGTCTTGCAGATTTAAGCCATGACCG 2111 ||||| || ||| ||| ||| |||||| ||||| || |||| |||||||| ||||| Sbjct 583 CACCAATGCGAGAAAAAGACCAGAATATTACCGCCATCCTGCAAGTTTAAGCCGTGACCC 642 Query 2112 GCACTGGCCGGATGGGCAAATAGCACGGGAATGTTCCCCGCATTCCAATCGCG 2164 || || || || || ||||| || | || || || || || ||||||||||| Sbjct 643 GCGCTAGCAGGGTGTGCAAACAGAATCGGTATTTTGCCTGCGTTCCAATCGCG 695 Score = 143 bits (158), Expect = 6e-30 Identities = 200/276 (72%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 7393 CGACGTTGCTCAGGTCCTCGAAGTCCTCCACGCTGGCCACACCGCCTCCAGCGAACGCCT 7452 ||||| || || || |||||||| || | || || |||||||| || ||||| || | Sbjct 8638 CGACGACACTAAGATCATCGAAGTCATCTTCACTCGCGACACCGCCACCTGCGAAGGCGT 8697 Query 7453 CACCATCACGCAAGAACTGCACGCCACCCAGCGAAGCGTTAATCCGCTTGCCGTAGTTGT 7512 |||||||||| |||||||| || ||||| || |||||| ||| | ||| || | || Sbjct 8698 CACCATCACGGAAGAACTGAACACCACCGAGTGAAGCGGAAATGCCCTTACC---TTGGT 8754 Query 7513 TGTCCTGCGCCCAGA--GTTCTATGTTGGCGTTGACGTAGCATCCGGCATACGGCCTGCC 7570 | || | || | | || || ||| |||||||||||||| || | || || | || Sbjct 8755 TATCATAGGCAAAAATGGTGATA-GTT-GCGTTGACGTAGCAGCCAGAGTAAGGGCGACC 8812 Query 7571 GTCCTGCGCGGTGAGCGGGGTCCGGTCACGGTCGACCACCAGTGGCCGTGCCTTGTTACG 7630 || |||||||| | ||| || ||||||||||| | |||||||| || || ||||| | Sbjct 8813 ATCTTGCGCGGTTAACGGAGTGCGGTCACGGTCAATAACCAGTGGTCGCGCTTTGTTGCT 8872 Query 7631 CGCAGAGACGTATAGGTGCCCTGCAAACCCGTCATA 7666 ||| || ||| | ||| ||||| | |||||||| Sbjct 8873 TGCACCGATGTACATGTGATCTGCATAGCCGTCATA 8908 Score = 82.4 bits (90), Expect = 2e-11 Identities = 194/293 (66%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 5055 TTGTGCGGCTGAAACAGCCGCCCCGCCCACCGTCCGGTGCGACTGGCCCCGTTGAATTGC 5114 || ||||||||||| | || || ||||| || || |||||| || ||| |||||| Sbjct 6706 TTTTGCGGCTGAAATAAGCGACCTGCCCAACGACCAGTGCGAGAAGCACCGCAAAATTGC 6765 Query 5115 AGCGTGCCGCGCAGGCGGCCATCGCGGCTGGTGCAGTTCAGCAGCGCCTGATACTTAGCG 5174 | || ||||||| || |||||| ||| | |||| ||||| | || ||| | Sbjct 6766 AATGTTCCGCGCAAACGACCATCGGAGCTTACACCATTCATTAGCGCTTTGTATTTACTG 6825 Query 5175 GTGCTGGTGGTGCTGGCTTGCCTGCGGATGGACAGCAGTTCCCGCACCGTCTCTGGCAAC 5234 ||||||||||| || ||||| || |||| | || || || | || | || | Sbjct 6826 GTGCTGGTGGTACTTGCTTGTAGTCGTATGGCTAATAGCTCACGTAACGGCAAAGGAATA 6885 Query 5235 AGCGGATCGTCAAGGCAACGCTCTACCGTGTGTTGCTGCATGTCCGGCAACGCCACGCCG 5294 |||||| | | | |||||||| ||| || ||||| || |||| | || || Sbjct 6886 TCCGGATCATTGATACGACGCTCTAATGTGCTTTTTTGCATATCAGGCAGATCAACACCA 6945 Query 5295 TGCGCGGTGCTCAGGTGGTGTAACAGTGCATCGCGCTGGGTTGCCGCCTGCAC 5347 |||| | || |||| ||| ||||| ||||| |||||||| || || Sbjct 6946 AAAGCGGCAGAGATATGTTGTAGCAGAGCATCACGCTGTGTTGCCGCTTGTAC 6998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116790825543072