Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_015269.1 Length=118351 Score E Sequences producing significant alignments: (Bits) Value seq147342 149 5e-31 seq57119 143 2e-29 seq216702 91.5 1e-13 seq21034 91.5 1e-13 >seq147342 Length=17694 Score = 149 bits (164), Expect = 5e-31 Identities = 255/357 (71%), Gaps = 10/357 (3%) Strand=Plus/Plus Query 46156 CATGGACGTAAGCAACCCTTTGAGAACTCTCCCGGATTCCAGAAGGTTAGAATTTCCCCA 46215 || ||||| ||||| ||| || || || || || || |||| || | ||||| || Sbjct 2081 CAGGGACGCAAGCAGCCCATTTCAAATTCACCAGGGTTATAGAAAGTGATGATTTCAGCA 2140 Query 46216 CGATCATCAATGCCCTTTTTCAGATTAT-GATAAATCTTGGCTAGTTGGTCAAACATAAG 46274 || |||||||| || || || | |||| || | | || | || || || || || | Sbjct 2141 CGGTCATCAATACCATTCTTTAAGTTATTGACGACTTTTTTC-AGCTGATCTAA-ATGTG 2198 Query 46275 A-CCATC-GGAATTAGTCCACTGA-CGTCCTTGAACACCATAGACTCGTCCCATATCATC 46331 ||||| || | | | ||| ||| || |||||||||||||| || || |||||||| || Sbjct 2199 TTCCATCTGGGAGTTG-CCA-TGAGCGCCCTTGAACACCATATACACGCCCCATATCGTC 2256 Query 46332 CTCACCTTTACGGTATGGATTGTCTAGCCAAGCTGAGTTTTCATTTGCATTAGCATTCCA 46391 |||||||| || | ||||| | ||||| ||| |||||| |||||||| |||||||| Sbjct 2257 TTCACCTTTGCGATGGGGATTATTCAGCCATGCTTGGTTTTCGTTTGCATTTGCATTCCA 2316 Query 46392 TGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCATACCCACGTAGATACCCAAT 46451 || ||| |||||| | || ||||| ||||| |||||| ||||| ||||| || | Sbjct 2317 AGTATTACAACCAATTTCACGAAATTGAGCTGCATTGTCATAGCCACGGAGATAACCGAG 2376 Query 46452 CATTTCCATTATTGCTTGTTT-TGCAAACGCCTTACGAGTAGTAATAAGGGGGAATT 46507 | ||| ||| || ||| | |||| |||||||| ||||| | |||||||| Sbjct 2377 AAGTTCAGCTATCGCCGCTTTATAGAAAC-TTTTACGAGTCGTAATCAAGGGGAATT 2432 >seq57119 Length=3586 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 37961 TTACGCATATCCATAATCATTTGGCCATCGTAGCCAGTGCCAACCACAGTCTGCGGAACA 38020 |||||||||||||||||||||| |||||| ||| | | ||||||||| | | || || Sbjct 2580 TTACGCATATCCATAATCATTTTGCCATCATAGTCTGCACCAACCACAATATTAGGCACC 2521 Query 38021 CCACCTTGATACTTCTGAGCACGAATCATTTCAACTTCCAGTTGCTTCCAGCGAATCATC 38080 |||||| ||| || ||||| ||| ||||| || | || ||||| ||||| Sbjct 2520 TCACCTTTATATTTGTGAGCTTTAATTTGTTCAATCTCTAACTGTTTCCAATTGATCATT 2461 Query 38081 TCAGGAGTAATGGTACGTTGTAATGCGGCGTTAGCTTCAGCTTCTTTCTTAGCTGCATAC 38140 ||| | ||||| |||||||||||| || ||||||||||||||||||| || |||||| Sbjct 2460 TCACGGGTAATAGTACGTTGTAATATCGCATTAGCTTCAGCTTCTTTCTGTGCAGCATAC 2401 Query 38141 AGTTTAGCATCAGCGTC 38157 | ||| ||||| || || Sbjct 2400 AATTTTGCATCCGCTTC 2384 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/179 (72%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 38440 ATCTTGTGCTTTAGGTACAGACTTACCAAACTCACGAATAGTAGACAGTAATTTTTCAGT 38499 |||||| || |||| ||| |||||||| || ||| || || | ||||||| Sbjct 2068 ATCTTGCGCATTAGCAACATCTTTACCAAATTCCAAAATCGTTGAAATCAATTTTTGGCG 2009 Query 38500 TACATATTTGTCTAACGCTTGATCCTGAGTACCTGCGTTAATACGGTTAAT--CGGTGCC 38557 ||||||||| ||||| |||| | | ||||| | |||||||| |||| ||| || Sbjct 2008 TACATATTTATCTAAAGCTTCACTTTCTGTACCACCATTAATACG--TAATACCGGAGCT 1951 Query 38558 TTAGAACCATCAAACTGCAACATAACAGTCAGGTCAACAGTGGATTTAAACTTATCCTG 38616 ||||||||||||||||| | ||| || || | |||||| | ||||| | ||||| || Sbjct 1950 TTAGAACCATCAAACTGAAGCATTACCGTAATATCAACAATAGATTTTAGTTTATCTTG 1892 >seq216702 Length=10464 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/220 (70%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 53247 TATGACGCTTGTCAGGGTTTAGAATATGAAATCAATACCATGTTCA-ACT-CTAATGGAC 53304 |||||||| | ||| |||||| |||||| | ||||| | ||| ||| | ||||| | Sbjct 1762 TATGACGCCTTTCAATCTTTAGAGTATGAAGTTAATACACT--TCACACTGCGAATGGCC 1705 Query 53305 AGAGTCCATTTATTACCTTTGGTTTTGGTCTAGGAACTTCTTGGGAAGCACGTCTAGTAC 53364 | | |||||| |||||||||||||||| || ||||| ||| |||||||| || | | Sbjct 1704 AAACCCCATTTGTTACCTTTGGTTTTGGCCTTGGAACCTCTAAAGAAGCACGATTAATTC 1645 Query 53365 AGAAAGCAATACTGAAAGTACGCATGGATGGTTTAGGTATCAATAAACGT---ACAGCTA 53421 || || | || |||||| ||||| | || | || ||| || ||| || || Sbjct 1644 AGCAATCTATTCTGAAAAACCGCATTGCGGGCCTTGG---CAAAAATCGTAAAACGGCGG 1588 Query 53422 TCTTCCCGAAACTGGTATTTGTACTTCGTGATGGCGTAAA 53461 | ||||| || || ||||| | | || |||||| |||| Sbjct 1587 TTTTCCCTAAGCTCGTATTCGCAATTAAAGATGGCCTAAA 1548 >seq21034 Length=11989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 84/104 (81%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 27375 ATTACATCGC-CTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGT 27433 ||||||| | ||| || || |||||| |||||||||| | ||||||||| ||||||| Sbjct 3725 ATTACATTGTACTG-GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGT 3667 Query 27434 GCGTTAAATCGAACAGCATAGCCAGAGACACGGATAGTCAATTG 27477 | ||| || || |||||||| || || ||||||||||||| ||| Sbjct 3666 GAGTTGAAACGTACAGCATAACCTGATACACGGATAGTCAGTTG 3623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377125576031072