Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq162160 192 7e-44 seq108727 134 2e-26 >seq162160 Length=10405 Score = 192 bits (212), Expect = 7e-44 Identities = 336/481 (70%), Gaps = 10/481 (2%) Strand=Plus/Plus Query 154629 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCAT 154688 ||||||||| |||| | || ||||| |||||||| | ||||| || | |||||| Sbjct 2803 CAACCTAACTCAGGGGCTCAAGGTGAATATGCAGGTTTATTAGCTATTCGTCGTTACCAT 2862 Query 154689 CAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAAC 154747 || | || | || | | |||||| | |||||||| |||| || || || || || Sbjct 2863 GAAAG-TCGCAATGAAGGGGAGAGAAATATTTGTTTGATCCCAGCTTCTGCTCACGGTAC 2921 Query 154748 TAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA 154807 |||||| ||| ||| |||||||| ||| |||| || | || ||||||||||| Sbjct 2922 TAATCCAGCTTCTGCGCATATGGCAGGTATGGAAGTGGTGGTAGTGCGTTGTGATGATGA 2981 Query 154808 TGGTAACATAGACATCAAAGATCTA-GAGAAGAAAGCAATCATGAATACATTTGAA---C 154863 ||||| || ||| | | ||| || | ||| ||||| || || | | ||| | Sbjct 2982 AGGTAATATCGACTTAACTGATTTACGTGAA-AAAGCC--CAGCAACATAGC-GAAGCTC 3037 Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 | || ||| | ||| | || |||||||| || || || |||| |||| | ||| | Sbjct 3038 TTTCTTGTGTGATGGTAACTTACCCATCAACCCACGGGGTATATGAAGAAAGTATTCGTG 3097 Query 154924 AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAA 154983 | | ||| | || |||| | |||| || || ||||| |||||||| |||||| | | Sbjct 3098 AAGTGTGTGAAATTATTCACCAATATGGCGGCCAAGTATACCTTGATGGCGCAAATATGA 3157 Query 154984 ATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACT 155043 |||| ||||| || || ||| ||| | |||||| ||||| | ||| ||||| | Sbjct 3158 ATGCTCAGGTTGGGTTAACAACTCCAGGCTTTATTGGTGCGGATGTTTCTCACCTAAATT 3217 Query 155044 TACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTG 155103 |||||||||||||||||||||| ||||| ||||| || || || | || ||||| |||| Sbjct 3218 TACATAAAACATTCTGTATTCCTCATGGCGGTGGTGGCCCAGGTATGGGGCCTATTGGTG 3277 Query 155104 T 155104 | Sbjct 3278 T 3278 >seq108727 Length=8103 Score = 134 bits (148), Expect = 2e-26 Identities = 346/519 (67%), Gaps = 20/519 (4%) Strand=Plus/Plus Query 154596 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 154655 ||||| ||||| || | ||| || ||||| ||||| || ||| | || || ||| Sbjct 6417 TGTGAGATCACCGGTTACGATAAAATTTCATTCCAACCAAATAGCGGAGCCCAAGGAGAG 6476 Query 154656 TATGCAGGACTGTTAGCAATCCA-AGCATACCATCAAGGATCAGGAGATGATAAAAGAAA 154714 ||||||||| || ||| |||| ||| || || ||| ||| || | || |||| Sbjct 6477 TATGCAGGATTGAGAGCTATCCGCAGC-TATCACGAAGCTCAAGGGGAAGTCAATCGAAA 6535 Query 154715 TGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 | |||||||||| ||| ||| || || ||||| ||||| ||| || ||||| Sbjct 6536 TATATGTTTGATTCCAATAAGT--GCTCACGGAACGAATCCAGCTTCAGCGCAAATGGCC 6593 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTA 154832 || |||| ||| | | ||| | | | ||||| | ||||| || | | || Sbjct 6594 GGTATGAGAGTGGAACCGATCAGGATTCGCGCAGATGGAAGTATAGATATGGTACACCTC 6653 Query 154833 GAGAAGAAAG-----CAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 || | |||| | | |||||| | ||| | || ||| | ||||| ||||| | Sbjct 6654 AAGGA-AAAGTTGGCCGAACATGAAAAG----GAATTATCTTGTTTGATGATCACATATC 6708 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT--AAGATCGTTCATGA 154945 | || ||| || || ||||| || | | | ||||| | ||| | |||||| | Sbjct 6709 CCTCGACAATGGGCGTGTTTGAGGATACGGT--GGCGGATATTTGCAAGTTGGTTCATAA 6766 Query 154946 CAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAA 155005 |||| ||||| || ||| | ||||| || ||| | ||||| || || ||| | Sbjct 6767 ACATGGCGGTCAAGTGTATTTGGATGGTGCTAATATGAATGCTCAAGTTGGATTGTGTCG 6826 Query 155006 ACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCC 155065 || | || ||||| ||||| | |||| | || ||||||||||| ||||||||||| Sbjct 6827 TCCTGGAGACTATGGAAGTGATGTGTCTCATTTGAATTTACATAAAACTTTCTGTATTCC 6886 Query 155066 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||||||| ||||| || | ||||| || ||||| Sbjct 6887 ACATGGAGGTGGTGGTCCCGGAATGGGTCCAATTGGTGT 6925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576901769888640