Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq21991 230 4e-55 seq88474 95.1 2e-14 >seq21991 Length=9696 Score = 230 bits (254), Expect = 4e-55 Identities = 315/439 (72%), Gaps = 2/439 (0%) Strand=Plus/Minus Query 208499 AGCACGTTTCTTGATATGTTCGTTATCTACAACGTCATCAAAGACAATGGAAGGATCGTT 208558 |||||| || || | ||| || || || | || ||||| | ||||| || || || Sbjct 8596 AGCACGCTTTAAAATTTCTTCATTTTCAACGATATCGTCAAAAATAATGGCTGGGTCATT 8537 Query 208559 AACGATGTTCCTGATGATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCCCA 208618 || || || | || ||||| ||||| ||| |||||| |||||||| || |||| Sbjct 8536 CACTATATTACGAATAATGTGTGTATATGAACGTGAGTGGATAGTTTCAGAAAACGCCCA 8477 Query 208619 GGTCTCAGCCCATGTTTCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTTGG 208678 || ||| |||| |||||||| || || || || | ||| | |||||| || || || Sbjct 8476 CGTTTCAACCCAAGTTTCCAGTTCAGGAATCGAAATCAGCGGCAATAATGCCACATTAGG 8417 Query 208679 ACCACGGCCCTGGATAGAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAACAGGTG 208738 | |||||||| ||||||||||| || || || |||||||| |||||||| || | || Sbjct 8416 GCTGCGGCCCTGAATAGAGTCCAGCAGCGTTTGGTATTTCAGATTACTGATAAAAATATG 8357 Query 208739 TTTCTCGTGATCTGGTAAAGCCATGTAGTCAATACGGTCACGGGAGACATCTACTTCTTC 208798 ||| ||||||||||| || || | |||||||||||||| || || || || |||||||| Sbjct 8356 TTTTTCGTGATCTGGCAACGCATTATAGTCAATACGGTCGCGAGATACGTCAACTTCTTC 8297 Query 208799 AGGACGCCAGAAGAAAGAAAGTTGTTTCTCAATGAGTTTCTCAAAGATCTCATACTTCTG 208858 ||| |||||||| || || | |||||| ||||| || || ||||| || ||||| || Sbjct 8296 AGGGCGCCAGAAAAACGACAATTGTTTTTCAATCAGCTTTTCAAAAATAGGGTACTTTTG 8237 Query 208859 TTGGTCGTAACGAGAAACGTTGACGTTTTGACCCAGGAACATGTGTTCTTGTAATTGATC 208918 || || || || | ||||| || ||| || | ||||| | || | | ||| || Sbjct 8236 CTGATCATAGCGCGCCACGTTAACTGGTTGGCCGAAAAACATCGGCTCCAGCATTTGGTC 8177 Query 208919 GTTTTTGTTTTGGTTGaaa 208937 || || || || ||||| Sbjct 8176 ATTCTTTTTCTG--TGAAA 8160 Score = 210 bits (232), Expect = 4e-49 Identities = 233/311 (75%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 208032 TGGCAGAGGATCTCTTTGTTCAGACCGATCATTGAACCATCTTTGAACAGATAGTCAGCC 208091 ||||| | || ||||| || | ||| ||||| || || || |||| || ||||||||| Sbjct 9244 TGGCATAAAATATCTTTATTTAAACCAATCATAGAGCCTTCGCTGAATAGGTAGTCAGCC 9185 Query 208092 CACTCTTTTTCTTGCTGAGCGGTAGCAACGAACATGTCGTATGACTCTTGACGACACTCT 208151 |||||||||||||||| || | |||||||| ||| || ||||||| ||||| Sbjct 9184 CACTCTTTTTCTTGCTCTGCTGCTTGAACGAACAAGTCATAACACTCTTGN----ACTCT 9129 Query 208152 GCTGCAATCTCAGCCATCTCTGGATCATCTTTACCAGAGTTCATCAGGTTGATGATGTGC 208211 || || || || ||||| ||||| ||||||| || ||| || |||||| | ||||| Sbjct 9128 GCCGCGATTTCGGCCATTTCTGGGTCATCTTGCCCTGAGCGCAACAGGTTCAACATGTGT 9069 Query 208212 TGAGTACCAACCATGTGAAGTGCTTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTA 208271 || || ||| | ||| || ||||| ||||||||||| | |||||||| ||||| || Sbjct 9068 TGTGTTCCAGTTAAGTGCAGCGCTTCATCACGTGCGATTAGCTTGATGATTTTAGCATTT 9009 Query 208272 CCTTCCATCAGCTTACGTTCGGCAAATGCGAATGAGCAAGCGAAGGATACGTAGAAACGA 208331 ||||||||||| | ||||| ||||| || ||||| || || ||| || |||||||| Sbjct 9008 CCTTCCATCAGTTCGCGTTCAGCAAACGCAAATGAACAGGCAAAGCTAACATAGAAACGG 8949 Query 208332 ATAGCTTCAAG 208342 || ||||| || Sbjct 8948 ATGGCTTCGAG 8938 Score = 96.9 bits (106), Expect = 6e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 207821 TTACAGTTGGAAATCACCGAACTCGGCAGTATCTACTTCTGAGTCGATCTGACCTACCAG 207880 |||||||| ||| || | || ||| | ||||| |||| ||||| || || || || | Sbjct 9640 TTACAGTTCGAAGTCGCTCAAATCGTCGGTATCGACTTGAGAGTCAATTTGGCCGACTAA 9581 Query 207881 GTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGAACGTTGTCAGTTACCAGCCATGA 207940 |||||| ||||| || || ||||| ||||| || ||||| |||| |||| ||||| Sbjct 9580 ATAAGAACTCACTTCAACCTCTTGAGGTGCAACTTGTACGTTATCAGACACCAACCATGC 9521 Query 207941 GTTAATCCATGGAATT 207956 ||| |||||||||||| Sbjct 9520 GTTGATCCATGGAATT 9505 >seq88474 Length=25282 Score = 95.1 bits (104), Expect = 2e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 16116 CGGAATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTC 16175 || ||||| ||||||||||||||||||||||||||| | ||||||||||| ||||| Sbjct 821 CGAAATGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTC 880 Query 16176 TATCC-ACTGAGCTAAGAGCGC 16196 ||||| ||||||||||| |||| Sbjct 881 TATCCAACTGAGCTAAGGGCGC 902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 907459178898720