Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq147342 167 2e-36 seq57119 132 3e-26 seq216702 82.4 5e-11 >seq147342 Length=17694 Score = 167 bits (184), Expect = 2e-36 Identities = 298/420 (71%), Gaps = 14/420 (3%) Strand=Plus/Plus Query 45203 CATGGACGTAAGCAACC--TTTCGAGAACTCTCCAGGATTCCAGAAGGTTAGAATTTCCC 45260 || ||||| ||||| || |||| | | || ||||| || |||| || | ||||| Sbjct 2081 CAGGGACGCAAGCAGCCCATTTCAA--ATTCACCAGGGTTATAGAAAGTGATGATTTCAG 2138 Query 45261 CACGATCATCAATGCCCTTCTTCAGGTTAT-GATAAATCTTGGCTAGTTGGTCAAACATA 45319 |||| |||||||| || ||||| | ||||| || | | || | || || || || || Sbjct 2139 CACGGTCATCAATACCATTCTTTAAGTTATTGACGACTTTTTTC-AGCTGATCTAA-ATG 2196 Query 45320 AGA-CCATC-GGAATTAGTCCACTGA-CGTCCTTGAACACCATAGACTCGTCCCATATCA 45376 | ||||| || | | | ||| ||| || |||||||||||||| || || |||||||| Sbjct 2197 TGTTCCATCTGGGAGTTG-CCA-TGAGCGCCCTTGAACACCATATACACGCCCCATATCG 2254 Query 45377 TCCTCACCTTTGCGATATGGATTGTCTAGCCAAGCTAAGTTTTCATTTGCATTAGCATTC 45436 || ||||||||||||| ||||| | ||||| ||| |||||| |||||||| |||||| Sbjct 2255 TCTTCACCTTTGCGATGGGGATTATTCAGCCATGCTTGGTTTTCGTTTGCATTTGCATTC 2314 Query 45437 CATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAATCATACCCACGCAGATACCCA 45496 || || ||| |||||| | || ||||| ||||| ||||| ||||| ||||| || Sbjct 2315 CAAGTATTACAACCAATTTCACGAAATTGAGCTGCATTGTCATAGCCACGGAGATAACCG 2374 Query 45497 ATCATTTCCATTATTGCTTGTTT-TGCAAACGCCTTACGAGTAGTAATAAGGGGGAATTC 45555 | | ||| ||| || ||| | |||| |||||||| ||||| | |||||||| Sbjct 2375 AGAAGTTCAGCTATCGCCGCTTTATAGAAAC-TTTTACGAGTCGTAATCAAGGGGAATTG 2433 Query 45556 CCCTGCACCTACGTTAAAAGTAAAGTCTGCGTCAATAATGGTGAGGCAACGAACCCCCGT 45615 ||| || | | | || ||| |||| ||||| ||| | |||||||| || || Sbjct 2434 ATTATTACCAACATCATATTCAAGGTCAGCGTTAATAACGGTTAAACAACGAACACCTGT 2493 >seq57119 Length=3586 Score = 132 bits (146), Expect = 3e-26 Identities = 446/700 (64%), Gaps = 51/700 (7%) Strand=Plus/Minus Query 36822 TATTACGCATATCCATGATCATTTGGCCATCATAACCAGTACCAACTACCGTCTGTGGTA 36881 |||||||||||||||| ||||||| ||||||||| | | |||||| || | | || | Sbjct 2582 TATTACGCATATCCATAATCATTTTGCCATCATAGTCTGCACCAACCACAATATTAGGCA 2523 Query 36882 CACCACCTTGATACTTCTGAGCACGGATCATTTCAACTTCCAGTTGCTTCCAGCGAATCA 36941 | |||||| ||| || ||||| || ||||| || | || ||||| |||| Sbjct 2522 CCTCACCTTTATATTTGTGAGCTTTAATTTGTTCAATCTCTAACTGTTTCCAATTGATCA 2463 Query 36942 TCTCAGGAGTAATGGTACGTTGCAATGCGGCGTTAGCTTCAGCTTCTTTCTTAGCTGCGT 37001 | ||| | ||||| |||||||| ||| || ||||||||||||||||||| || || | Sbjct 2462 TTTCACGGGTAATAGTACGTTGTAATATCGCATTAGCTTCAGCTTCTTTCTGTGCAGCAT 2403 Query 37002 ACAGTTTAGCATC---------------------------------TGCGTCACGTTCAT 37028 ||| ||| ||||| ||| | |||||| Sbjct 2402 ACAATTTTGCATCCGCTTCTTGGCGCATCGCAAATGAACTTGCTTGTGCATTACGTTCTC 2343 Query 37029 TAGCAATAGCTTGGTTGTTGCG-AGCTTCACGATCTGCTTCTGCTTGTTTAACTTTTTGC 37087 |||| || |||| |||||| | || || | || ||||| || ||| |||| | Sbjct 2342 TAGCGATGGCTT-GTTGTTCAGCAGACTCTCTTTCCGCTTCAGCAATAACAACCTTTTTC 2284 Query 37088 TGTGCTTCCTGTTCAACACGAGCTAAT------TCAGCTTTAGCAGCATTAACCTGTTCT 37141 || ||| | |||| || | || ||||| || |||| || ||| Sbjct 2283 TGAGCTAATT------CACGCTCTTTTTCTGCCTCTGCTTTTGCTTGGTTAATTTGCTCT 2230 Query 37142 TCACGAACTTTGGTATTCTGTACCTGTTCCATGATTACCGGTGGCAAAGTAATATCCTGA 37201 | || | ||| ||||| || || || | || |||||||||||||| || Sbjct 2229 TGGCGCATTTTAGTATTAACCACTTGCTCTTGTACAACTTCAGGCAAAGTAATATCTTGG 2170 Query 37202 AGGAACACCTGCTTAACTGTGTAACCATATGGGCGTGCATACTCTTCAACTTCCTGTTGA 37261 | | | | || | ||| || ||||| ||| ||||||| ||| || | | || Sbjct 2169 ATCATAATTTCTTTTATTGTATAGCCATAAGGGGATGCATACCCTTGAATAGCATCACGA 2110 Query 37262 ATTGCAGTTTGCAATTGAGCCTGAATTTTAGCATCAAATAAATCTTGTGCTTTAGGTACA 37321 || | ||| |||| || | | || | | | |||||| || |||| ||| Sbjct 2109 ATAGATTCTTGTAATTTTCTTTGTGTATCTGCTGTATAAAGATCTTGCGCATTAGCAACA 2050 Query 37322 GACTTACCAAACTCACGAATAGTAGACAGTAATTTTTCAGTTACATATTTGTCTAACGCT 37381 |||||||| || ||| || || | ||||||| ||||||||| ||||| ||| Sbjct 2049 TCTTTACCAAATTCCAAAATCGTTGAAATCAATTTTTGGCGTACATATTTATCTAAAGCT 1990 Query 37382 TGATCCTGAGTACCTGCATTAATACGGTTAAT--CGGTGCTTTAGAACCATCAAACTGCA 37439 | | | ||||| |||||||||| |||| ||| |||||||||||||||||||| | Sbjct 1989 TCACTTTCTGTACCACCATTAATACG--TAATACCGGAGCTTTAGAACCATCAAACTGAA 1932 Query 37440 ACATAACAGTCAGGTCAACAGTGGATTTAAACTTATCCTG 37479 ||| || || | |||||| | ||||| | ||||| || Sbjct 1931 GCATTACCGTAATATCAACAATAGATTTTAGTTTATCTTG 1892 >seq216702 Length=10464 Score = 82.4 bits (90), Expect = 5e-11 Identities = 153/220 (70%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 52924 TATGACGCTTGTCAGGGTTTAGAATATGAAATCAATACCATGTTCA-ACT-CTAATGGTC 52981 |||||||| | ||| |||||| |||||| | ||||| | ||| ||| | ||||| | Sbjct 1762 TATGACGCCTTTCAATCTTTAGAGTATGAAGTTAATACACT--TCACACTGCGAATGGCC 1705 Query 52982 AGAGTCCATTTATTACCTTTGGTTTTGGTCTAGGAACTTCCTGGGAAGCACGTCTAGTAC 53041 | | |||||| |||||||||||||||| || ||||| || |||||||| || | | Sbjct 1704 AAACCCCATTTGTTACCTTTGGTTTTGGCCTTGGAACCTCTAAAGAAGCACGATTAATTC 1645 Query 53042 AGAAAGCAGTACTGAAAGTACGCATGGATGGTTTAGGTATCAATAAACGT---ACAGCTA 53098 || || | | |||||| ||||| | || | || ||| || ||| || || Sbjct 1644 AGCAATCTATTCTGAAAAACCGCATTGCGGGCCTTGG---CAAAAATCGTAAAACGGCGG 1588 Query 53099 TCTTCCCGAAACTGGTATTTGTACTTCGCGATGGCGTAAA 53138 | ||||| || || ||||| | | || |||||| |||| Sbjct 1587 TTTTCCCTAAGCTCGTATTCGCAATTAAAGATGGCCTAAA 1548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346850213251784